Gene PSPTO_1981 details

Gene Information

• Locus tag: PSPTO_1981
• Symbol: cheZ
• ID: 1183626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2166386
• End bp: 2167072
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637393359
• Product: chemotaxis protein CheZ
• Protein accession: NP_791804
• Protein GI: 28869185
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG3143] Chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.260664
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGCTGA TCCATGAGCT CAATCAGACC CGTGACCGCG GCCTTTATCA GGAAGTGGGC 
AAGCTGACGC GTGAGTTGCA CAGTGCAATC GTCAATTTCC ACATTGATCC GCATATGCCT 
CAGGCCGAAG AGGTGTCGCA GATCACGGAC GCGACGGAGC GTCTTTCCTA CGTCGTCAGG 
CTGACCGAGA ACGCGGCCAA CCGTACGATG GATCTGGTCG AGGAAAGCAC GCCGATCATG 
AATGGTCTGA GTTCCGACGC CAAGGCGTTG AGCGAAGACT GGGGACGCTT CATGCGTCGC 
GAAATCGGTG CCGAAGAGTT TCGTGAACTG GCCAAGCGCG TCGATGGTTT TCTGACGCGT 
ACCGAGAAGG AAAGCCATAC GGTTTCCGCG CACCTCAACG ATATTCTGCT TGCTCAGGAT 
TACCAGGACC TCACCGGTCA GGTGATCAAG CGCGTCACGC AACTGGTGAC CGAAGTAGAG 
GGCAATTTGC TCAAGCTGGT GCTCATGGCC AGCCATGTCG ATCGCTTCGC TGGCATCGAA 
CATGACGAAG AATCCATCCT TGCTGAAAAA GATCCTAAAA AACATCTCGA CAAGGGTGAA 
GGTCCGCAGA TTCATGCCGA TAAACGTGAA GACGTCGTAT CCGGACAGGA TGATGTAGAC 
GATCTGCTAT CGAGCCTCGG CTTCTAA 

 

Protein sequence

MQLIHELNQT RDRGLYQEVG KLTRELHSAI VNFHIDPHMP QAEEVSQITD ATERLSYVVR 
LTENAANRTM DLVEESTPIM NGLSSDAKAL SEDWGRFMRR EIGAEEFREL AKRVDGFLTR 
TEKESHTVSA HLNDILLAQD YQDLTGQVIK RVTQLVTEVE GNLLKLVLMA SHVDRFAGIE 
HDEESILAEK DPKKHLDKGE GPQIHADKRE DVVSGQDDVD DLLSSLGF