| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1976 |
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| Symbol | flhA |
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| ID | 1183621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2160485 |
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| End bp | 2162614 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393354 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | NP_791799 |
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| Protein GI | 28869180 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0869734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCGCT CTCAATTACT CAGTAGCGCA CGCAGCAACA TCACAGGCCT TGGCCGTGGT
CAGTTGGGCG TTCCGTTGTT GTTGCTGATC ATGCTGGCAA TGATGATGTT GCCCATGCCA
CCGTTCCTGC TGGACGTACT GTTCACGTTC AACATTGCAT TGTCCATCGT CGTGCTGCTG
GTTTGCGTCT ATGCCCTGCG GCCGCTGGAT TTCTCTGTGT TTCCGACCAT TCTGCTGGTC
GCCACGTTGT TGCGTCTGGC GCTGAACGTC GCGTCGACGC GGGTGGTCAT GCTTCACGGT
CAGGACGGTC ATGCTGCTGC GGGCAAGGTG ATTCAGGCCT TCGGTGAAGT GGTGATCGGC
GGTAACTACG TCGTCGGTAT CGTGGTGTTC GCCATCCTGA TGATCATCAA CTTCGTGGTC
ATCACCAAGG GTGCCGGGCG TATTTCCGAG GTGAGCGCGC GCTTCACCCT CGACGCGATG
CCCGGCAAGC AGATGGCAAT CGACGCCGAC CTCAACGCCG GCCTCATCGA CCAGCCGGAA
GCCAAGCGCC GTCGTGCCGA AGTGGCCCAG GAGGCCGAGT TCTACGGTTC CATGGACGGT
GCCAGCAAGT TTGTACGCGG CGACGCAATT GCTGGCCTGC TGATTCTGTT CATCAACCTC
ATCGGCGGCA TGCTGGTCGG TATCTTTCAG CATAATATGA CCTTCGCCGA TGCGGGTCGC
GTTTACACCC TGCTGACCAT CGGTGACGGT TTGGTGGCGC AATTGCCATC ACTGCTCCTG
TCCACCGCTG CCGCGATCAT GGTGACCCGT GCTTCCGGTT CGGAAGAAAT GGGCAAGCTG
ATCAATCGCC AGATGTTTGC CTCACCCAAG GCGCTGGCGG TATCCGCCGC GATCATGATC
GTGATGGGGC TGGTGCCAGG CATGCCGCAC TTCTCCTTTA TCAGCCTTGG TCTGGTGGCC
GCAGGTGGCG CATACCTGCT GTGGAAGAAA GACAATCAGG TGAAGGTCGA GGCGCTGGCC
GAAGTGCAGC GTCAGCAGGA CCTGCTGCCG TCGCCGACTC GCGTTCAGGA CTCCAAGGAG
CTGGGCTGGG ATGACGTAAC CCCGATCGAT ATCATCGGCC TGGAAGTGGG TTACCGTCTG
ATTCCGCTGG TGGACCGCAA TCAGGGTGGT CAACTGCTGG CGCGGATCAA GGGTGTGCGC
AAGAAACTGT CACAGGAACT TGGCTTTCTG ATGCCCACCG TACACATCCG CGACAACCTC
GATCTGGCAC CCAGCGCTTA CCGTCTGACG CTGATGGGGG TGATCCTCGC CGAAGCCGAG
ATCTATCCGG ATCGCGAACT GGCGATCAAC CCCGGTCAGG TGTTCGGCAC GCTGAATGGC
ATCACCGCCA GAGACCCGGC GTTTGGCCTG GAAGCCGTCT GGATCGAAAT CAGCCAGCGC
AGTCAGGCGC AGTCACTCGG TTACACCGTG GTAGACGCCA GTACGGTAGT GGCAACCCAC
TTGAACCAGA TTCTCTACAA GCACTCTCAC GAGCTGATCG GTCACGAAGA AGTCCAGCAA
TTGATGCAAT TGCTGTCCAA AAGCTCGCCC AAGCTCGCTG AAGAGCTGGT GCCTGGCGTG
CTGTCCCTGT CGTCGCTGCT CAACGTGCTG CAGGCGTTGC TGGCCGAGCA CGTACCTGTG
CGGGATATTC GCAGCATTGC AGAGGCTATC GCCAACAACG CCGGGAAGAG TCAAGATACC
GCCGCTCTGG TGGCCGCCGT GCGTGTCGGT CTGAGTCGCG CAATCGTCCA AAGCATTGTA
GGCGTTGAGC CGGAGCTGCC TGTTATCACT CTGGAACCAA GGTTGGAACA GATATTGCTC
AATAGTTTGC AGAAGGCTGG TCAGGGTCAG GAAGAAGGCG TTCTGCTTGA ACCGAGCATG
GCTGAAAAGC TCCAGCGTTC GTTGATTGAA GCGGCCCAGC GTCAGGAGAT GCAAGGGTTG
CCGGTCATTC TTCTGGTAGC AGGTCCTGTC CGGGCGATGC TGTCACGATT TGGACGATTG
GCTGTACCGA ACATGCATGT TCTGGCGTAC CAGGAAATAC CGGACAACAA GCAAGTAACC
ATCGTAGCGA CTGTCGGGCC GAACGGCTGA
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| Protein sequence | MDRSQLLSSA RSNITGLGRG QLGVPLLLLI MLAMMMLPMP PFLLDVLFTF NIALSIVVLL
VCVYALRPLD FSVFPTILLV ATLLRLALNV ASTRVVMLHG QDGHAAAGKV IQAFGEVVIG
GNYVVGIVVF AILMIINFVV ITKGAGRISE VSARFTLDAM PGKQMAIDAD LNAGLIDQPE
AKRRRAEVAQ EAEFYGSMDG ASKFVRGDAI AGLLILFINL IGGMLVGIFQ HNMTFADAGR
VYTLLTIGDG LVAQLPSLLL STAAAIMVTR ASGSEEMGKL INRQMFASPK ALAVSAAIMI
VMGLVPGMPH FSFISLGLVA AGGAYLLWKK DNQVKVEALA EVQRQQDLLP SPTRVQDSKE
LGWDDVTPID IIGLEVGYRL IPLVDRNQGG QLLARIKGVR KKLSQELGFL MPTVHIRDNL
DLAPSAYRLT LMGVILAEAE IYPDRELAIN PGQVFGTLNG ITARDPAFGL EAVWIEISQR
SQAQSLGYTV VDASTVVATH LNQILYKHSH ELIGHEEVQQ LMQLLSKSSP KLAEELVPGV
LSLSSLLNVL QALLAEHVPV RDIRSIAEAI ANNAGKSQDT AALVAAVRVG LSRAIVQSIV
GVEPELPVIT LEPRLEQILL NSLQKAGQGQ EEGVLLEPSM AEKLQRSLIE AAQRQEMQGL
PVILLVAGPV RAMLSRFGRL AVPNMHVLAY QEIPDNKQVT IVATVGPNG
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