| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1973 |
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| Symbol | fliQ |
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| ID | 1183618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2157899 |
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| End bp | 2158168 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393351 |
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| Product | flagellar biosynthetic protein FliQ |
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| Protein accession | NP_791796 |
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| Protein GI | 28869177 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
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| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00808662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCCGG AAGTTGCCGT CGATCTGTTT CGCGAAGCGC TGTGGCTGAC CACGGTGCTG
GTGGCGATCC TCGTAGTTCC GAGCCTGTTG TGCGGCCTGC TGGTGGCGAT GTTTCAGGCG
GCCACGCAGA TCAACGAACA GACTCTGAGC TTCCTGCCGC GTCTGCTGGT GATGCTGGTG
ACGCTCATCG TCATCGGCCC CTGGCTGCTG AAAATATTCA TGGAATACAT GCTGTCGCTG
TACACCAGTA TTCCGACGCT GATCGGCTAG
|
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| Protein sequence | MTPEVAVDLF REALWLTTVL VAILVVPSLL CGLLVAMFQA ATQINEQTLS FLPRLLVMLV
TLIVIGPWLL KIFMEYMLSL YTSIPTLIG
|
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