| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1960 |
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| Symbol | |
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| ID | 1183605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2147493 |
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| End bp | 2148311 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393338 |
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| Product | flagellar assembly protein Flih, putative |
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| Protein accession | NP_791783 |
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| Protein GI | 28869164 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.31844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTT CCAATAAAGA ATCGGCCAGC GACCTCATTC GCGCCAAGGA CGCCGGGTTA
CTCGATATCT GGGCATTGCC CAGCTTCGAT CCGCACGTGG AACCCGAGCC TGAACCCGAG
CCGGAACCGG TCGACGAGCC GGCGGAAATG GAAGAGGTGC CGCTTGACGA GGTTCAGCCG
CTGACCCTGG AAGAACTCGA AAGCATCCGC CAGGAAGCCT GGAACGAAGG CTTTGCCACG
GGTGAAAAAG AAGGCTTTCA CAGTACTCAG CTAAAAGTGC GCCAGGAGGC GGAAGTCGTT
CTTGCGGCCA AGGTTGCCAG CCTTGAACAA CTGATGGGCC ATCTGTTGGC ACCTATCGCC
GAGCAGGACA CACAGATCGA AAAGGCCGTC ATTCATCTGG TCGAGCACAT CGCGCGGCAG
GTCATTCAGC GCGAACTGGT CACTGATTCC GGGCAAATCG CCAGCGTGTT GCGCGATGCG
CTCAAGTTAT TGCCGATGGG CGCGCAGAAC CTGCGAATCT TCATCAACCC CCAGGACTTC
CTGCTGGTCA AGGCCATGCG CGAGCGTCAT GAGGAGGCGT GGAAAATCGT CGAGGACGAG
GACTTGCTGC CGGGTGGTTG CCGAATCGAA ACCGAACACA GCCGTATCGA CGCCAGCGTC
GAAACACGCA TCGCCCTGGC GATCTCGAAA ATGCACGATC AGTTGCATGA ACAGGTGACT
CATCCTGCCG CCGCTGACCT GAGCGTCGAT CTGGATGCCT CGCCCGTCAG CACGGCGAAA
ACTGAAGATT CTGACGTGGA CGCTCTCGAT GCGCCTTGA
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| Protein sequence | MSSSNKESAS DLIRAKDAGL LDIWALPSFD PHVEPEPEPE PEPVDEPAEM EEVPLDEVQP
LTLEELESIR QEAWNEGFAT GEKEGFHSTQ LKVRQEAEVV LAAKVASLEQ LMGHLLAPIA
EQDTQIEKAV IHLVEHIARQ VIQRELVTDS GQIASVLRDA LKLLPMGAQN LRIFINPQDF
LLVKAMRERH EEAWKIVEDE DLLPGGCRIE TEHSRIDASV ETRIALAISK MHDQLHEQVT
HPAAADLSVD LDASPVSTAK TEDSDVDALD AP
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