| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1951 |
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| Symbol | fliD |
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| ID | 1183596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2137378 |
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| End bp | 2138856 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393329 |
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| Product | flagellar hook-associated protein FliD |
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| Protein accession | NP_791774 |
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| Protein GI | 28869155 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.151214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTC CAATTACATC GACAACGGGC CTGGGTTCGG GTCTGGCAAT TACCGCCATC
GTTCAGGGGT TGGTCGGTGC TGAAAAAGCG CCCAAGCAGA ACCAGATCGA CAAGCAGACC
GCCACCACCT CTGCATCGCT GTCGGGCGTC AGTCAGTTGA CGTCTGCACT GGCTGCGTTT
CAGAAAACCC TGGATACCCT GGGCAGCTCG ACGACGCCTG CGTTTCAGGG TTTCGCTGCG
ACATCTGCCA ATGAAGCAGT GGTCAAGGCG ACTGCCGGCA ACACGGCCGT CAACGGTAGT
TACGCGATAG GTATCACCCA GCTGGCAACC CCTTCAAAGG TCGCGACAGC CGCGCTGAGC
TCTACGCAGG CGAGTGCTAT TCCGAGTGGT ACCCTGAAAA TCACTCAGAA TGGCACTGAC
TACAGTGTCG CGATCGACAA GACCTCGACA CTGCAGGAAG TGCGCGACAA GATCAACTCG
TCGCTGCAGG GCAAAGGCAT TACCGCCAAC ATTATCAACG ACGACAACGG TGCCAGGCTG
GTCTTCAGTT CGACGACCAC CGGCAAAGGC AGTGACATTT CGGTGGTGGG TGCTTCCGGG
CAGGAAGCGC TGAACATTGA TGGCACCAAG TTGATGAGCG ACTCAAGCAC GGGGACCGAT
GCCAGCGGCA AAGCAATTCC CGGAGCCGGT GCGATTACTG CGACCGCCAA GGACGCTGCC
TTCACGGTTG ACGGTCTGAG TCTGACCAGC AAGACGAACA CGGTCAGCAC CGCGATTTCC
GGCATGACCT TTGATCTGGT CGCGCCAAGT GCCGCTGGAG CAACGACCAC TGTCACAGTG
GCTACCAACA CCGATGGGCT GAAGGCGTCG CTGCAGTCCT TCGTGGACTC CTACAACACG
CTGGCCACCC TGGTGACTTC CCTGACCAAG GGTTCGATCA GCGACAAAGG CGTTTTCACG
GCGGCCGCCC TTACCGGTGA CGCAACGCCG CGTGCGCTGC TGGCGACTAT TCGCGATCAG
TTGGCGGGCG CTTCTTCAAG GGCCGGTCTG AGTGCTCTGT CGCAGTTGGG CATCAAGACC
CAGCAGTCCA ACGGTACGCT GTCGCTCGAC ACCGCTACAT TCACCGCAGC GCTGAACGAC
AAAAAGCTGG GCAGCCAGAT CCAGACCATG TTCACCGGTA CGGGCGCAAC AAATGCTGAC
GGTACGGTGG ATGGCGGCCT GGTTGCTCGG ATGAGCAAAG CGCTTTTACC CTACACGAAG
GCCGACGGCG TTCTGGCCAG CAAGACAAGC AGTCTGACTA AAGTCCAGAC CCGAATCGCC
AGTGATCAGG ATGCCCTTGA TCGTCGTATC GAAAGTCTGA CGGCCAGCCT GACCAAGAAG
TACAACGCGA TGGACCTGGT GGTCGGGCAG CTCAAAGCGA CCGCGACCAG TATCACTTCG
ATATTCGAAG CGATGAACGC GCAGAAAAAC GCTTCGTAA
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| Protein sequence | MASPITSTTG LGSGLAITAI VQGLVGAEKA PKQNQIDKQT ATTSASLSGV SQLTSALAAF
QKTLDTLGSS TTPAFQGFAA TSANEAVVKA TAGNTAVNGS YAIGITQLAT PSKVATAALS
STQASAIPSG TLKITQNGTD YSVAIDKTST LQEVRDKINS SLQGKGITAN IINDDNGARL
VFSSTTTGKG SDISVVGASG QEALNIDGTK LMSDSSTGTD ASGKAIPGAG AITATAKDAA
FTVDGLSLTS KTNTVSTAIS GMTFDLVAPS AAGATTTVTV ATNTDGLKAS LQSFVDSYNT
LATLVTSLTK GSISDKGVFT AAALTGDATP RALLATIRDQ LAGASSRAGL SALSQLGIKT
QQSNGTLSLD TATFTAALND KKLGSQIQTM FTGTGATNAD GTVDGGLVAR MSKALLPYTK
ADGVLASKTS SLTKVQTRIA SDQDALDRRI ESLTASLTKK YNAMDLVVGQ LKATATSITS
IFEAMNAQKN AS
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