Gene PSPTO_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1942 
SymbolflgI 
ID1183587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2121690 
End bp2122799 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID637393320 
Productflagellar P-ring protein FlgI 
Protein accessionNP_791765 
Protein GI28869146 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.152396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC TCAAGCAACT GATAGCCGCG ACCTTGCTGT TGTCTGCAGC GTTCGGCGCA 
CACGCCGAAC GTCTGAAAGA CATCGCCAGC ATCTCCGGCG TGCGGGCCAA CCAATTGATC
GGTTACGGTC TGGTGGTGGG GCTCAACGGT ACGGGCGACC AGACCACCCA GACCCCGTTC
ACGCTGCAGA CCTTCAACAA CATGCTCTCG CAGTTCGGCA TCAAGGTGCC GGCAGGTTCG
GGCACCGTGC AGTTGAAGAA CGTCGCGGCC GTTGCGGTGT ACGCGGATCT GCCAGCGTTT
GCCAAGCCGG GTCAGACGGT CGATATCACC GTGTCCTCGA TCGGTAACTC CAAGAGCCTG
CGCGGCGGTG CGTTGTTGAT GACGCCGATG AAAGGTGTCG ACGGCAACGT CTACGCCATT
GCGCAGGGCA ACCTGGTGGT CGGCGGTTTT GACGCAGAAG GCCGCGATGG CTCGAAAATC
ACGGTTAACG TTCCGTCGTC GGGCCGTATT CCCGGTGGTG CGTCGGTCGA GCGTTCGGTA
CCGAGTGGCT TCAATCAGGG CAATACCCTG ACCCTGAACC TCAACCGTTC CGACTTCACC
ACGGCCAAGC GGGTTGTGGA CAAGATCAAC GAATTGCTCG GCCCTGGCGT TGCCCAGGCG
CTGGACGGCG GTTCGGTGCG TGTGACCGCG CCGCTTGATC CGGGCCAGCG TGTCGATTAC
CTGTCGATTC TGGAAAACCT GGAAGTCGAT CCGGGCCAGA CCGCTGCCAA GGTCATCATC
AATTCGCGGA CCGGCACTAT TGTCATCGGT CAGAACGTCA AGGTGTCGCC TGCCGCTGTG
ACCCACGGCA GCCTGACCGT GACCATCACC GAAGACCCGA TTGTCAGCCA GCCGGGTGCC
TTGTCCGGTG GCCAGACCGC TGTCGTACCG CGCTCACGGG TCAACGCCCA GCAAGAGCTG
CACCCGATGT TCAAATTTGG TCCAGGCACC ACGCTGGACG AGATCGTCCG TGCGGTCAAT
CAGGTGGGCG CTGCGCCCGG TGACCTGATG GCCATCCTCG AAGCCCTGAA ACAGGCCGGC
GCTTTGCAAG CCGACCTGAT CGTCATCTGA
 
Protein sequence
MIKLKQLIAA TLLLSAAFGA HAERLKDIAS ISGVRANQLI GYGLVVGLNG TGDQTTQTPF 
TLQTFNNMLS QFGIKVPAGS GTVQLKNVAA VAVYADLPAF AKPGQTVDIT VSSIGNSKSL
RGGALLMTPM KGVDGNVYAI AQGNLVVGGF DAEGRDGSKI TVNVPSSGRI PGGASVERSV
PSGFNQGNTL TLNLNRSDFT TAKRVVDKIN ELLGPGVAQA LDGGSVRVTA PLDPGQRVDY
LSILENLEVD PGQTAAKVII NSRTGTIVIG QNVKVSPAAV THGSLTVTIT EDPIVSQPGA
LSGGQTAVVP RSRVNAQQEL HPMFKFGPGT TLDEIVRAVN QVGAAPGDLM AILEALKQAG
ALQADLIVI