Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1942 |
Symbol | flgI |
ID | 1183587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2121690 |
End bp | 2122799 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393320 |
Product | flagellar P-ring protein FlgI |
Protein accession | NP_791765 |
Protein GI | 28869146 |
COG category | [N] Cell motility |
COG ID | [COG1706] Flagellar basal-body P-ring protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.152396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC TCAAGCAACT GATAGCCGCG ACCTTGCTGT TGTCTGCAGC GTTCGGCGCA CACGCCGAAC GTCTGAAAGA CATCGCCAGC ATCTCCGGCG TGCGGGCCAA CCAATTGATC GGTTACGGTC TGGTGGTGGG GCTCAACGGT ACGGGCGACC AGACCACCCA GACCCCGTTC ACGCTGCAGA CCTTCAACAA CATGCTCTCG CAGTTCGGCA TCAAGGTGCC GGCAGGTTCG GGCACCGTGC AGTTGAAGAA CGTCGCGGCC GTTGCGGTGT ACGCGGATCT GCCAGCGTTT GCCAAGCCGG GTCAGACGGT CGATATCACC GTGTCCTCGA TCGGTAACTC CAAGAGCCTG CGCGGCGGTG CGTTGTTGAT GACGCCGATG AAAGGTGTCG ACGGCAACGT CTACGCCATT GCGCAGGGCA ACCTGGTGGT CGGCGGTTTT GACGCAGAAG GCCGCGATGG CTCGAAAATC ACGGTTAACG TTCCGTCGTC GGGCCGTATT CCCGGTGGTG CGTCGGTCGA GCGTTCGGTA CCGAGTGGCT TCAATCAGGG CAATACCCTG ACCCTGAACC TCAACCGTTC CGACTTCACC ACGGCCAAGC GGGTTGTGGA CAAGATCAAC GAATTGCTCG GCCCTGGCGT TGCCCAGGCG CTGGACGGCG GTTCGGTGCG TGTGACCGCG CCGCTTGATC CGGGCCAGCG TGTCGATTAC CTGTCGATTC TGGAAAACCT GGAAGTCGAT CCGGGCCAGA CCGCTGCCAA GGTCATCATC AATTCGCGGA CCGGCACTAT TGTCATCGGT CAGAACGTCA AGGTGTCGCC TGCCGCTGTG ACCCACGGCA GCCTGACCGT GACCATCACC GAAGACCCGA TTGTCAGCCA GCCGGGTGCC TTGTCCGGTG GCCAGACCGC TGTCGTACCG CGCTCACGGG TCAACGCCCA GCAAGAGCTG CACCCGATGT TCAAATTTGG TCCAGGCACC ACGCTGGACG AGATCGTCCG TGCGGTCAAT CAGGTGGGCG CTGCGCCCGG TGACCTGATG GCCATCCTCG AAGCCCTGAA ACAGGCCGGC GCTTTGCAAG CCGACCTGAT CGTCATCTGA
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Protein sequence | MIKLKQLIAA TLLLSAAFGA HAERLKDIAS ISGVRANQLI GYGLVVGLNG TGDQTTQTPF TLQTFNNMLS QFGIKVPAGS GTVQLKNVAA VAVYADLPAF AKPGQTVDIT VSSIGNSKSL RGGALLMTPM KGVDGNVYAI AQGNLVVGGF DAEGRDGSKI TVNVPSSGRI PGGASVERSV PSGFNQGNTL TLNLNRSDFT TAKRVVDKIN ELLGPGVAQA LDGGSVRVTA PLDPGQRVDY LSILENLEVD PGQTAAKVII NSRTGTIVIG QNVKVSPAAV THGSLTVTIT EDPIVSQPGA LSGGQTAVVP RSRVNAQQEL HPMFKFGPGT TLDEIVRAVN QVGAAPGDLM AILEALKQAG ALQADLIVI
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