Gene PSPTO_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1940 
SymbolflgG 
ID1183585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2120090 
End bp2120878 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637393318 
Productflagellar basal-body rod protein FlgG 
Protein accessionNP_791763 
Protein GI28869144 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.426352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCCTG CACTATACGT CGCCAAAACC GGCCTTGCCG CTCAGGACAC CAACCTGACC 
ACCATCTCCA ACAACCTGGC GAACGTTTCG ACCACAGGTT TCAAGAGTGA TCGTGCCGAG
TTCCAGGACC TGCTGTATCA GATCAAGCGT CAGCCAGGTG CTCAGTCCAC TCAGGACAGC
GAGCTGCCAT CGGGCCTGCA ACTGGGTACC GGTGTGCGCA TCGTCGGCAC GCAGAAGAAC
TTCACTGCTG GCAGCCTGCA AACCACCAAC AACCCGCTGG ACCTGGCGGT CAACGGTCGC
GGTTTCTTCC AGGTGACCCA GCCTGACGGC ACCGTGGCCT ACAGCCGCGA CGGTACGTTC
CACCTGGACG CCAACGGCCA GATCGTCACT GCCAATGGCT ACGCTCTGGA GCCTGCGATT
GTGGTTCCGC AGAATGCCCA GACCTTCACG GTCGGCCAGG ACGGTACTGT TTCGGTGACG
CTGGCAGGTG CAACCGCCAC GCCGCAGATC ATCGGCAACA TCCAGACCGC CGACTTCATC
AACCCGGCCG GCCTGCAGGC CATCGGTGGC AACCTGTACC TGGAAACCGG TTCGAGCGGC
GCGCCGCAGA TCGGCACGCC CGGCCTCAAC GGCCTGGGCC CGACCCTGCA GAACACTCTG
GAAAACTCCA ACGTCAGCAC CGTCGAGGAA CTGGTCAACA TGATCACGAC CCAGCGCGCT
TACGAGATGA ACTCCAAAGT GATCTCGACG GCTGACCAGA TGCTGCAAAA CCTGACTCAG
AACCTGTAA
 
Protein sequence
MLPALYVAKT GLAAQDTNLT TISNNLANVS TTGFKSDRAE FQDLLYQIKR QPGAQSTQDS 
ELPSGLQLGT GVRIVGTQKN FTAGSLQTTN NPLDLAVNGR GFFQVTQPDG TVAYSRDGTF
HLDANGQIVT ANGYALEPAI VVPQNAQTFT VGQDGTVSVT LAGATATPQI IGNIQTADFI
NPAGLQAIGG NLYLETGSSG APQIGTPGLN GLGPTLQNTL ENSNVSTVEE LVNMITTQRA
YEMNSKVIST ADQMLQNLTQ NL