Gene PSPTO_1934 details

Gene Information

• Locus tag: PSPTO_1934
• Symbol: flgC
• ID: 1183579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2114381
• End bp: 2114821
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637393312
• Product: flagellar basal-body rod protein FlgC
• Protein accession: NP_791757
• Protein GI: 28869138
• COG category: [N] Cell motility
• COG ID: [COG1558] Flagellar basal body rod protein
• TIGRFAM ID: [TIGR01395] flagellar basal-body rod protein FlgC

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTAG CCAATGTGTT CAACATTGCC GGTAGCGCCA TGAGTGCACA GACCACGCGT 
CTGAACACTA CGGCCAGTAA CATCGCCAAC GCCGAGACCG TGTCGTCGAG CATGGACCAG 
ACCTATCGCG CCCGTCACCC GGTGTTTGCC ACCGTGATGC AGGGTCAGCA GTCCACAGGC 
GGTTCGTTGT TCCAGGATCA GGGCGAAGCG GGTCAGGGCG TTCAGGTCAA CGGCATCATC 
GAAGACAGTT CCAACCTCGA AGCGCGCTAC GAGCCCAATC ATCCTTCCGC TGACAAGGAC 
GGGTATGTCT ATTACCCCAA CGTCAATGTC GTGGAAGAAA TGGCCGACAT GATTTCTGCC 
AGCCGGTCTT TCCAGACCAA CGCTGAAATC ATGAACACCG CTAAATCCAT GATGCAGAAG 
GTTCTGACCC TCGGTCAGTG A 

 

Protein sequence

MSLANVFNIA GSAMSAQTTR LNTTASNIAN AETVSSSMDQ TYRARHPVFA TVMQGQQSTG 
GSLFQDQGEA GQGVQVNGII EDSSNLEARY EPNHPSADKD GYVYYPNVNV VEEMADMISA 
SRSFQTNAEI MNTAKSMMQK VLTLGQ