Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1926 |
Symbol | |
ID | 1183571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2108384 |
End bp | 2109130 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393304 |
Product | flagellar protein, putative |
Protein accession | NP_791749 |
Protein GI | 28869130 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.210434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTT CTCGACACCT CGCATTAGAA ACCCGCTGGC TTCTCTGCGC AATCGCCCTG CTGTGCCTTT CCGGCACGGT GAGCCTCGCT CGTGCAGAGA ATTTCACACT GCCTGAACAG CTTATCGGCG TCACCCAAGG GTTTCTTGAG TTCACAGTAG AAGACTATTT GGCAACCAAC CAGATTGACG GGCGTCACGA CATACAGGTC AAGCAGCTCG ACCCGCGTTT ACGGATGGGT GCCTGCGACA AGGATTTGAC AGCCACACTG GAAAGCCCGC GCCCGGTTGG ACGGGTCACC GTGCGGGTGC GTTGCGAAGG CTCATCGCCC TGGACGGTGT TCGTGCCCGC CCAGGTGCAG TTGTTCCGCA ACGTGGTCAC GGTCATGCGG CCGCTGAAAC GCGACGCCAT CGTGACTGAA GAAGATATCG CGATGCGTGA GCGGGATGTC AGCAGCCTGG GCCAGGGTTT CCTGGCATCG CTTGATCAGG CAGTCGGTCA GAAGGTTGTC CGACAAATGG TCATCGATCA GGTCATCACC CCCGTGGCGC TTGAACAGCC CCAGATGATT CACAAGGGCG ATCAGGTGGT GATCATCGCC CGCAGCGGCT CGCTGGCGGT ACGGATGCCC GGCGAAGCGA TGTCCGACGG CGGTTTCAAC GAACAGATAC GGGTGAAAAA CCTTAACTCC CAACGGGTGA TCAAAGCGAA TGTCACCGGT CCAGGACAGG TAGAAGTGGC CATGTAA
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Protein sequence | MTISRHLALE TRWLLCAIAL LCLSGTVSLA RAENFTLPEQ LIGVTQGFLE FTVEDYLATN QIDGRHDIQV KQLDPRLRMG ACDKDLTATL ESPRPVGRVT VRVRCEGSSP WTVFVPAQVQ LFRNVVTVMR PLKRDAIVTE EDIAMRERDV SSLGQGFLAS LDQAVGQKVV RQMVIDQVIT PVALEQPQMI HKGDQVVIIA RSGSLAVRMP GEAMSDGGFN EQIRVKNLNS QRVIKANVTG PGQVEVAM
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