Gene PSPTO_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1926 
Symbol 
ID1183571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2108384 
End bp2109130 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID637393304 
Productflagellar protein, putative 
Protein accessionNP_791749 
Protein GI28869130 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.210434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTT CTCGACACCT CGCATTAGAA ACCCGCTGGC TTCTCTGCGC AATCGCCCTG 
CTGTGCCTTT CCGGCACGGT GAGCCTCGCT CGTGCAGAGA ATTTCACACT GCCTGAACAG
CTTATCGGCG TCACCCAAGG GTTTCTTGAG TTCACAGTAG AAGACTATTT GGCAACCAAC
CAGATTGACG GGCGTCACGA CATACAGGTC AAGCAGCTCG ACCCGCGTTT ACGGATGGGT
GCCTGCGACA AGGATTTGAC AGCCACACTG GAAAGCCCGC GCCCGGTTGG ACGGGTCACC
GTGCGGGTGC GTTGCGAAGG CTCATCGCCC TGGACGGTGT TCGTGCCCGC CCAGGTGCAG
TTGTTCCGCA ACGTGGTCAC GGTCATGCGG CCGCTGAAAC GCGACGCCAT CGTGACTGAA
GAAGATATCG CGATGCGTGA GCGGGATGTC AGCAGCCTGG GCCAGGGTTT CCTGGCATCG
CTTGATCAGG CAGTCGGTCA GAAGGTTGTC CGACAAATGG TCATCGATCA GGTCATCACC
CCCGTGGCGC TTGAACAGCC CCAGATGATT CACAAGGGCG ATCAGGTGGT GATCATCGCC
CGCAGCGGCT CGCTGGCGGT ACGGATGCCC GGCGAAGCGA TGTCCGACGG CGGTTTCAAC
GAACAGATAC GGGTGAAAAA CCTTAACTCC CAACGGGTGA TCAAAGCGAA TGTCACCGGT
CCAGGACAGG TAGAAGTGGC CATGTAA
 
Protein sequence
MTISRHLALE TRWLLCAIAL LCLSGTVSLA RAENFTLPEQ LIGVTQGFLE FTVEDYLATN 
QIDGRHDIQV KQLDPRLRMG ACDKDLTATL ESPRPVGRVT VRVRCEGSSP WTVFVPAQVQ
LFRNVVTVMR PLKRDAIVTE EDIAMRERDV SSLGQGFLAS LDQAVGQKVV RQMVIDQVIT
PVALEQPQMI HKGDQVVIIA RSGSLAVRMP GEAMSDGGFN EQIRVKNLNS QRVIKANVTG
PGQVEVAM