Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1921 |
Symbol | |
ID | 1183566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2103671 |
End bp | 2105014 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393299 |
Product | glutamine synthetase |
Protein accession | NP_791744 |
Protein GI | 28869125 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCA ATGACCCCCA TTCGCTGGCG CAACTGCTGA TGGGCATTGA TGAAGTGGAG TGCGTGACTC CGGACTTGAA CGGCGTGCCG CGTGGCAAGG TGATGACCGC TGCCGGCTTT CTGGAGGGCA GGCGATTGCA GCTTGCGCGG GGCGTGTTGT TGCAATGCAT CATGGGCGGC TATCCACCTG CGCGATTTTA CGGCAGCGAT GACGGCGACC TTGCGCTGGT CAGCGACCCG CAGCAGGTCC ACCGCCTGCC CTGGAGCGAG CAGCCTCGCG CCCTGGCCAT CTGCGATGCC GAGCAATTGA ATGGTGAACG CTGCCTGTTA TCGACACGCG GCCAGCTCAA GTCGGTGATC GCCCGCTACG CCGCGCAGGG GCTGGCCCCG GTGGTTGCCA CCGAACTCGA ATTTTTTGTC TTCGCGGCCA ACCCCGAGCC GCTCCAGCCG TTTGTGCCGC CTCTCGGGCT GGACGGGCGA CGTGAGCTGG GGCATTCGGC GTTCAGTATC AGTTCCAACA ACGGTCTGCG GCCGTTTTTC GCCGAGGTCT ATGCCTGCAT GGCGGCGCTC GGGTTGCCGC GTGACACGGT GATGCATGAA ATGGGTGTCA GTCAGTTCGA GATCAATCTG TTGCATGGCG ATCCGTTGCT GCTGGCCGAC CAGACCTTTC TGTTCAAGCA CCTGCTCAAG GAGGTCGCGC TCAAGCACGG CCTGATTGTG GTCTGCATGG CCAAGCCGCT CGCGCACACC GCGGGCAGCT CGATGCATAT TCATCAAAGC GTGGTGGCAG CCGAGTCCGG ACAAAACGTG TTCAGCGATG CGAACGGCGA GGCCACAGAC ACCTTCCGCC ACTTCATTGG CGGCCAGCAG GCGTGCATGG CTGACTTTAC CGCGCTGTTT GCCCCTAACG TGAATTCCTA CCAGCGCCTC TACCATCCTT ATGCGTCGCC CAATAATGCT TGCTGGTCCC ACGACAATCG CGCTGCCGGG CTACGTATTC CGGCAAGTGC GGCGGCGGCC CGACGGGTGG AAAATCGTCT GCCGGGCGCC GACGCGAACC CTTATCTGGC CATTGCCGCA AGCCTGGCGG CCGGTCTGCA CGGCATCGAA CAGCGCCTGG AGCCGACGGC GCCGATGCAG GGCGAGATCC AGGTGCCGAA AGAATTATCG CTGCCTTGTA CCTTGCATGC GGCTGTTGAG CGTCTGAAAA GCAGTCAGTT GGCCAAGGAA CTGTTTGGTC ATGAGTTCAT CGAAGGCTAC GTCGCATCGA AGACCCTGGA ACTGACCAGT TTTTTCGACG AAATAACTCC CTGGGAACGG CGCGTTCTGG CTGCCCAGGT TTAA
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Protein sequence | MTRNDPHSLA QLLMGIDEVE CVTPDLNGVP RGKVMTAAGF LEGRRLQLAR GVLLQCIMGG YPPARFYGSD DGDLALVSDP QQVHRLPWSE QPRALAICDA EQLNGERCLL STRGQLKSVI ARYAAQGLAP VVATELEFFV FAANPEPLQP FVPPLGLDGR RELGHSAFSI SSNNGLRPFF AEVYACMAAL GLPRDTVMHE MGVSQFEINL LHGDPLLLAD QTFLFKHLLK EVALKHGLIV VCMAKPLAHT AGSSMHIHQS VVAAESGQNV FSDANGEATD TFRHFIGGQQ ACMADFTALF APNVNSYQRL YHPYASPNNA CWSHDNRAAG LRIPASAAAA RRVENRLPGA DANPYLAIAA SLAAGLHGIE QRLEPTAPMQ GEIQVPKELS LPCTLHAAVE RLKSSQLAKE LFGHEFIEGY VASKTLELTS FFDEITPWER RVLAAQV
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