| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1914 |
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| Symbol | |
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| ID | 1183559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2093986 |
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| End bp | 2094708 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393292 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_791737 |
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| Protein GI | 28869118 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.176962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACGG GAGCTTCTTC CGGCATCGGC AGCCAGGTTG CGATCTGGTT AAGTCAGCAG
GGGGCTCGGG TGGTGCTGGT TGCCAGAAAT CAGGAGCGGC TCGAGGCAAC CAGGCAGCAG
CTTCACGGTG AAGGGCATGG TGTCGAGCCA TTCGATTTGC TTGAGAACTC GGTGGTTGGC
GGCTGGATGA AGAATCTGGC TAAAACCTAT GCTCCCTTCG ACGGGCTGGT ACATGCCGCA
GGTGTGCAAA TGCCGCTGCC CATTCGCGCA TTGGGCATTG ATCAGTGGGA AACGGTCTTT
GCCACCAACG TCACCTCGGG CTTTTCGCTG ATCAAGTCTT TCAGGCAGAA AGGGGTGTTC
ACTCAAGGCG CCAGCATCGT TCTGCTGTCA TCGGTGATGG CGCAGGTCGC CCAGCCGTCG
CTGATGGCCT ACTGCGCCAG CAAAGGCGCG GTCGAATCCA TGGTTCGCGC GGCGGCGCTC
GAGTTGGCCC GCGACGGAAT ACGCGTGAAC GCCATCGCGC CAGGCGTGGT GAAAACCGAA
ATGACTCGCA AACTTGAGGA CACGGTCGGC GTCGATGCCA TGAGCGCAGT CGAGCAGCGG
CATCCATTGG GTTTTGGTGA GCCGCTGGAC ATCGCCTATG CGGTCAATTA CCTGCTGTCC
CCGGCGGCTC GCTGGGTGAC CGGGACGTCG ATGGTCGTTG ACGGGGGGTA TCTGGCGCAA
TGA
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| Protein sequence | MVTGASSGIG SQVAIWLSQQ GARVVLVARN QERLEATRQQ LHGEGHGVEP FDLLENSVVG
GWMKNLAKTY APFDGLVHAA GVQMPLPIRA LGIDQWETVF ATNVTSGFSL IKSFRQKGVF
TQGASIVLLS SVMAQVAQPS LMAYCASKGA VESMVRAAAL ELARDGIRVN AIAPGVVKTE
MTRKLEDTVG VDAMSAVEQR HPLGFGEPLD IAYAVNYLLS PAARWVTGTS MVVDGGYLAQ
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