| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1910 |
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| Symbol | |
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| ID | 1183555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2089979 |
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| End bp | 2090728 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393288 |
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| Product | hypothetical protein |
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| Protein accession | NP_791733 |
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| Protein GI | 28869114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3103] SH3 domain protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00493464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGCCG CTCCCATCGT TAGCCGGCCC GTTCAACGAG GCTTTATTTT CATTCAGATA
AAGATAATTA TCGCCATGTC TCGTCATTTT TCTGCACTTC TTTCTCGTGC TCCCGGCCTG
TTCGCCGTTT CGCGTCGCGT GCTCGGCGCT GGCCTGTTTG GCGCTGCGTT GACCCTTGTG
GTACCTGCCA GCGTGCAGGC CGCGGGCAAT GATCGCTGGG TCAGCGACAG CCTCACCACT
TACGTACGCA GCGGGCCGAC TGATGGCCAC CGGATCGTCG GCACGTTGAA ATCCGGGCAG
AAGCTTGAGC TGCTCACCAC CTCGGGTAAC TTCAGCCAGG TGCGTGGCGA AGGCGGCGCG
ACAGTGTGGA TTCCCAGCAG CGACCTGCAG GACGTCCCTG GCCAGATCGA GCGCGTGCCG
CAATTGACCC AACAGGTCGC CGAGCTGACC GAGCAACTGG CAGGCATCGA CAACACCTGG
AAAACCCGCG TGCAAGGCAT GCAGGAAACG CTGGATGCGC GCAAGAAACT GGTCGATGAA
CTGGAAGCCC GCACCAAGGT CCTCAACGAT CAGTTGGCCG ACTCCCAGGC CGAACTGCGC
TCCACGCAGG CGCGGCTTGG CGATGAAAAC AAACAGGTCA TGATGCGTTA CATGGTTTAC
GGCGGCAGCA TTGCTGGTGC GGGCCTGTTA GTCGGCCTGA TTCTTCCGGC GCTGACCAAG
GGCCGCAAAA AGAATGATGG CTGGGTGTAA
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| Protein sequence | MPAAPIVSRP VQRGFIFIQI KIIIAMSRHF SALLSRAPGL FAVSRRVLGA GLFGAALTLV
VPASVQAAGN DRWVSDSLTT YVRSGPTDGH RIVGTLKSGQ KLELLTTSGN FSQVRGEGGA
TVWIPSSDLQ DVPGQIERVP QLTQQVAELT EQLAGIDNTW KTRVQGMQET LDARKKLVDE
LEARTKVLND QLADSQAELR STQARLGDEN KQVMMRYMVY GGSIAGAGLL VGLILPALTK
GRKKNDGWV
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