| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1909 |
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| Symbol | |
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| ID | 1183554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2088230 |
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| End bp | 2089603 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393287 |
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| Product | decarboxylase family protein |
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| Protein accession | NP_791732 |
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| Protein GI | 28869113 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0510531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCCAA GACAAGTGAT TAACGCCACC GTAAGCCCCA AAGGCAGCCT TGAAACCCTG
TCCCAGCGTG AAGTGCAGCA ACTCAGCGCG GCCGGTTCAG GCAGCACCTA CACCCTGTTT
CGCCAGTGCG CCCTGGCCAT TCTCAATACC GGCGCCCATG TCGATAACGC CAAGACCATT
CTTGAAGCGT ACGAAAGCTT CGAAGTGCGT ATTCATCAGC AGGATCGTGG CGTGCGCCTG
GAGCTGCTCA ACGCTCCGGC AGACGCGTTT GTCGATGGTG AAATGATCGC CAGCACCCGC
GAGATGCTGT TCAGCGCCCT GCGCGACATC GTCTACACCG AAAGCGAACT GGACAGCCAG
CGCATCGACC TGAGCAACTC TCAGGGCATC ACCGATTACG TGTTCCATCT GCTGCGCAAC
GCCCGCACCC TGCGCGCCGG TGTCGAGCCA AAGATGGTGG TGTGCTGGGG TGGCCACTCG
ATCAACACCG AAGAATACAA ATACACCAAG AAAGTCGGCC ACGAACTGGG CCTGCGCAGC
CTGGACATCT GTACCGGCTG CGGCCCCGGC GTGATGAAAG GCCCGATGAA AGGCGCAACC
ATCGCCCACG CCAAGCAACG CATTGTCGGC GGTCGCTACC TAGGCCTGAC CGAGCCGGGC
ATCATCGCTG CCGAAGCGCC TAACCCGATC GTCAACGAGC TGGTGATCCT GCCGGACATC
GAGAAACGTC TCGAAGCCTT CGTGCGTGTC GGTCACGGCA TCATCATTTT CCCGGGCGGC
GCAGGTACTG CCGAAGAATT CCTGTACCTG TTGGGCATCC TGATGCACCC GGACAACAAG
GACGTGCCGT TCCCGGTGAT CCTGACCGGC CCTAAAAACA CCGAGCCGTA CCTGCAACAG
CTGCACGCGT TTGTCGGTGC CACGCTGGGT GAAGAAGCGC AGCGTCATTA CCAGATCATC
ATCGACAACC CGGCGGACGT CGCCCGGCAG ATGACTCAGG GCCTGAAAGA AGTGAAACAG
TTCCGCCGCG AGCGCAACGA TGCGTTTCAC TTCAACTGGC TGCTGAAGAT CGAAGAAAGC
TTCCAGCACC CCTTCGATCC GACCCACGAA AACATGGCAA AACTGCAGCT CAACCACGAC
GTGCCTACGC ACGAACTGGC CGCCAACCTG CGCCGGGCGT TTTCCGGGAT TGTGGCGGGC
AACGTCAAGG ACAAGGGCAT TCGCCTGATC GAAGAGCACG GCCCCTATCA GATTCAGGGC
GACCCTTCGA TCATGGGCCC GCTGGACAAG CTGCTGCAGG CGTTTGTCGA CCAGCACCGG
ATGAAGTTGC CGGGTGGCGC GGCCTACGTG CCGTGCTATC AGGTTGTGGC TTGA
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| Protein sequence | MLPRQVINAT VSPKGSLETL SQREVQQLSA AGSGSTYTLF RQCALAILNT GAHVDNAKTI
LEAYESFEVR IHQQDRGVRL ELLNAPADAF VDGEMIASTR EMLFSALRDI VYTESELDSQ
RIDLSNSQGI TDYVFHLLRN ARTLRAGVEP KMVVCWGGHS INTEEYKYTK KVGHELGLRS
LDICTGCGPG VMKGPMKGAT IAHAKQRIVG GRYLGLTEPG IIAAEAPNPI VNELVILPDI
EKRLEAFVRV GHGIIIFPGG AGTAEEFLYL LGILMHPDNK DVPFPVILTG PKNTEPYLQQ
LHAFVGATLG EEAQRHYQII IDNPADVARQ MTQGLKEVKQ FRRERNDAFH FNWLLKIEES
FQHPFDPTHE NMAKLQLNHD VPTHELAANL RRAFSGIVAG NVKDKGIRLI EEHGPYQIQG
DPSIMGPLDK LLQAFVDQHR MKLPGGAAYV PCYQVVA
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