| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1908 |
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| Symbol | pobR |
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| ID | 1183553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2087309 |
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| End bp | 2088178 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393286 |
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| Product | transcriptional regulator PobR |
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| Protein accession | NP_791731 |
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| Protein GI | 28869112 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.104323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGAC CTGCCATTAC CGCGATACCG GTGTTCAAGC TTTATGGCGA AACCACCGCC
TGGCCGACGC CGGACCTGAT CCACTGCGAG TCGATCCCCG AGCGCAGCAG GATGCACGAC
TGGGAGATCA AGCCGCATCG GCATGGCGAC CTGGTGCAGT TGCTGTATGT GCAATCGGGC
AAGGCGATGC TCAAGGTCGA GGACCGGGTC AGGAAGGTCG AGACCGCTTC GCTGCAGGTG
GTCCCCGCAT TGAGCGTGCA CACTTTCAGG TTTGCCGAAG ATATTCAGGG GCACATTCTC
AGCCTGGCCA AACCCTTGGT GGAGCAGCTT GAGACGACGC TCGACAGCTC GGCGATGCGC
ACGGCACGGT GTTACGAGCT AGGGGCGGAC AGCCATTACG TCGACACGCT GTTCAGCGCC
ATCGCTCGTG AATACCGACA GCCCAGAGCC GGTCGTGATC TGATGCTGCA TTCATTGATC
AACGTGCTGG TGGTCTGGCT CAGTCGGCGC AACAGCGAAG AGGCCGGCGA ACAGGTGCAG
ACAATGGACC GCGGGCGAGA GCATCTGCAG GTGTTCATGC ATCAACTGGA AACATGTTTT
CGCGAGCACT GGTCCATCGA GCAACATGCG CAGGCCATGG GCATCAGCGC CGCGCATTTG
AATGCGCTGT GTCGGCGGCT GTGCGACCAG TCGGCGTTGC AGATCATCAG CCAGCGACTG
TTGCTGGAGG CCAAGCGCAA CCTGATTTAC ACCACCCTGA CCATCAATCA GGTGTCCGAC
AGCCTGGGGT TTTCCGAGCC GGCTTATTTT TCGCGGTTTT TCAAGCGCGC CACCGGGCAG
TCGCCCAGAG AATTTCGTCA GCAGAAATGA
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| Protein sequence | MSRPAITAIP VFKLYGETTA WPTPDLIHCE SIPERSRMHD WEIKPHRHGD LVQLLYVQSG
KAMLKVEDRV RKVETASLQV VPALSVHTFR FAEDIQGHIL SLAKPLVEQL ETTLDSSAMR
TARCYELGAD SHYVDTLFSA IAREYRQPRA GRDLMLHSLI NVLVVWLSRR NSEEAGEQVQ
TMDRGREHLQ VFMHQLETCF REHWSIEQHA QAMGISAAHL NALCRRLCDQ SALQIISQRL
LLEAKRNLIY TTLTINQVSD SLGFSEPAYF SRFFKRATGQ SPREFRQQK
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