| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1906 |
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| Symbol | |
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| ID | 1183551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2084332 |
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| End bp | 2085657 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393284 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791729 |
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| Protein GI | 28869110 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0516487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTA CTTCGACCCA CGAGGTGGGC GACGCTGACG GCAATCATGT CTACCGTCGC
ATCACCCTGC GCCTTATACC GTTTATCTTC ATCTGCTACC TGTTCAACTA CCTGGACCGC
GTGAACGTCG GCTTCGCCAA GCTGCAAATG CTTGACGCCC TGAGCTTCAG CGAGACGGTC
TATGGCCTGG GCGCCGGTAT TTTCTTCATT GGCTACGTGT TGTGCGGCCT GCCCAGCAAT
CTGGCGCTGA ACCGCTTCGG GCCACGCCGC TGGATCGGCC TGATGATGAT CACCTGGGGC
ATCTTTTCCA CCTGCCTGCT GTTCGTCACC ACGCCGGTCG AGTTCTACGT GCTGCGCTTT
CTGACCGGCA TGGCCGAGGC CGGTTTCTTC CCCGGTATCG TGCTGTACTT CTCGCGCTGG
TACCCGAACC AGCGTCGCGG CCGAATCATG GCACTGTTCA TGTCGGCCAT CCCGGTCTCC
GGGCTGCTCG GCGGGCCGTT TTCCGGCTGG ATCCTCAACC ACTTTGCCGC CGGTCAGGGC
GGCATGGCGG GCTGGCAGTG GATGTTTCTG ATTCAGGGCC TGCCTACCGT GGCGCTTGGC
GTGCTGGCGT TCTTTGTGTT GTGTGACAAG GTTGAAGACG CACGCTGGCT CACGCCTGAA
CAGCGCCAGC GGGTCAAGAC CGATATCACC CACGATGAAC TGAATCGACC GGTGCAAGGC
AAAAGCTCGG TGGCTTCGGT GCTGACCATG CCATTCATCT GGGTTCTGGG CTTTATCTAC
TTCTGCATTC AGAGCGGTGT GTATGCGATC AACTTCTGGC TGCCTTCGAT CATCAAGAAC
CTGGGTTTCA GCGACGCGCT GGTGATCGGC TGGATCAGCG CCGTGCCATA CCTGATGGCA
GGCGTGTTCA TGCTGCTGGT CGGCCGCTCC GCAGACCTGC GCAATGAGCG CCGCTGGCAT
TTGGTAGTAC CGATGCTGAT GGGCGCGACT GGCCTGATCA TCGCCGCCAA CTTTGCGACA
GTGCCCCTCA TCGCCATCCT CGGCCTGACC ATCGCGACCA TGGGTGCGCT GACCAGCCTG
CCAATGTTCT GGCCCTTGCC CACCGCACTG CTGAGCGCCA GCGTTGCAGC GGGCGGGCTG
GCGCTGATCA ATTCAATCGG CCAGATGGCA GGCTTCCTCA GCCCGTATCT GGTGGGCTGG
ATCAAGGACC AGACCGGTTC GACCACCCTG GCGCTGTACT CGCTGGCCGC GCTGACCATC
GTCGGCAGCC TGGTGGCCTT GCGGGTCAGC CGTCAGAGCG CGGTGAAGGT CGCAGCCGCT
GCCTGA
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| Protein sequence | MTLTSTHEVG DADGNHVYRR ITLRLIPFIF ICYLFNYLDR VNVGFAKLQM LDALSFSETV
YGLGAGIFFI GYVLCGLPSN LALNRFGPRR WIGLMMITWG IFSTCLLFVT TPVEFYVLRF
LTGMAEAGFF PGIVLYFSRW YPNQRRGRIM ALFMSAIPVS GLLGGPFSGW ILNHFAAGQG
GMAGWQWMFL IQGLPTVALG VLAFFVLCDK VEDARWLTPE QRQRVKTDIT HDELNRPVQG
KSSVASVLTM PFIWVLGFIY FCIQSGVYAI NFWLPSIIKN LGFSDALVIG WISAVPYLMA
GVFMLLVGRS ADLRNERRWH LVVPMLMGAT GLIIAANFAT VPLIAILGLT IATMGALTSL
PMFWPLPTAL LSASVAAGGL ALINSIGQMA GFLSPYLVGW IKDQTGSTTL ALYSLAALTI
VGSLVALRVS RQSAVKVAAA A
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