Gene PSPTO_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1904 
Symbol 
ID1183549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2080595 
End bp2084023 
Gene Length3429 bp 
Protein Length1142 aa 
Translation table11 
GC content56% 
IMG OID637393282 
Producthypothetical protein 
Protein accessionNP_791727 
Protein GI28869108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.185676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGTTG CTGCGCAGAG AATTTCCCGC ATGACCGATA AAAACGGCAC CCATCGACAA 
CGACGTGCTG CACTGTTCCC CAAAACCCCG GCGACCGCCA CCAGCCTGTG CCCTTTCAGA
GGGCCTAATA TCGCCATCGT CCCGGTGCGC TATGCGCTGG ATCGCTCGCG CTATGACGCT
GACCCCACGC AACTGAAGCC ACTGCCCAAA GATGGCCAAT GGGCCCGCTT GCCGACGCTG
AAAACACGCA GTTACACCTT GCGCCAACTG TACGACGGCT ACGTTTACGT GTTCGACGAG
ACGGCCGGCA CGTTGCACGA ATACGCAGCC TCAGCCAGCG ACGGCCATCT GAGCCGCATC
GTCTGGAGCG ATGCGCACAT CGGTAATGAC CAGCGAACCG GTGCCGATGA GGGACAACCC
TTTCTGCTGT ATCCACGAGA GCACCGCCTG CACATCGCCT TTTCCCCGAT GCAGTGGACG
TGGCGAATGT GCGAGCACAT GCGCTCCCAT GCCCCAAGCC GCGCGTTGTG GATGAAGGCG
CTGGACCTGG CCAGCTACTG CCTCACCATG GCCGAGCCGG ACACCCTGCC GCTGGATCGC
ATCGCCGAGG CCGTGGCGGA TATCGACAAA GACTGTGTTG TGGAAGATGG CCGTTTTGCA
GATTCGGCGA TTCCCAGTGT TCGCCCGCCA TCAGAAGGCG CAGAACCCGA TCCGTTATGG
GCACCGCTGG GCGCCGATGT CTTCTGGCAA GGCAGCGTCT ACGATCAGGA CAGCTCTCTG
GTCATTGCCC TCGATGACCC GCTCGCCGTT TTCAACGACT TGGGCATGCA GCTGGCCGCC
GATCAGGCGG CTTTTCGGGA ATGGCAAAGC GCCCACGAAC ACAAGATCCA GATTGCCCAG
ACCGTCGCCA CGCTGTGCGG TGCAGAGAGC GAAGCAGAGA AGCTGCCGGC GTCGGTGCGT
GGTGATGCGC TGCGCACGCA TCAGTACCTG AGCGAGGTCG AAGCCTACTT TGAACAATGC
ATTCTTGAAG AAGCACAGAT CAGCAGTAGC AACGTTCCTG GAGATTTTCT GCTGCTGCCG
GACATGTTCA AGAGCCTGGA CATGCGCAAA TCGATCGAAA CACGTTATGG CAGCGCGCCG
ACCGATGAGG GCGCGCAGGC CTGGAAAGAT CGCCACAAAT GGCGGCGCGA GGTCGATCTG
AGCAGTGCCC GCCAGTACCT TTTGCAGCAC CTGCCGACCG GAGACAAACG CCTGCAACAG
GTGCGTGACA CGCAAAGCGA TTTCCAGCAC TGGGCGGCAC ATATAGGCAC CGAACCGCTC
AAGCTGTTCA TCGACACCAC ACACCCGAAA ACCCTGCTGT ATTTGCAGAC GATCATGCTC
AATCTGCAGA TCATCTATGC GCAGGACAGC GCCGCAAATG CCTGGCTGGC CGAGCAGGAA
GCCAACACCA GCAGCCTGTT TGGCACCCTG CGTTATGGTT TTTCGCCAGC GCTCAAGCAC
GCCCTGCATC AGGAAGCCGA CGCACTGCTG AACGGCCTCG GCGACGTCAC CAATCTGGCC
ACGCGCATCG GTGAACTCAA TGGCGTGCTC AACCATCGGG GCTTTGCCGA CAAGCCGTGG
ATGAAGGCGC TGAAACAGCC TGTTCAAGAC ACCTTCAAAG CCCTCGGCGA ACTGGCCAGC
GGTGCCGGCA AAGCCAGGTT TGAAAGTGTA TTACTGGCAT GGGTGCCCAT CGACAGCCGC
ATGGCCCTTG GCAAGCAGCA GAACATCGTT GCGTTGCTTC GCACCCTGCT GATCGGCCAG
ATATTGCTCG ACTCGACAGC ACGCGTCGCG ATCAATGAGC AGACAGTGAC CAAGCTCAAA
CAGTGGGTAA GTGAGTGGCA AGTCCTCAAC AAGCAAATCA GCGAGCTGGT GCGCAGTTGG
CAATACCCGA ACGCCTACAA CACGCGCCAA AGCACCGCTC GCAAATTGCA GGCCCATAAA
CACAAACTGC GCGTTCACGA ACTGAGCATC CCTGCCCTGC TCGACTTTCA GAACAACGAA
TACGCCAAGC TATTGCAGGA CGAGATTCGC CAGTACTTCC AGTCCGGCAA AACCCTGGCC
AAGGACTGGC TCGCCCGCGC CAGAGGCTGG ACCGACCGAC TGGGCGGCAC GGCAGGCTCG
ATCACCTCGG GCGTGGTCAT GCTTAACCTT ATCAATACTG CCTTCCTCTA TCGGGACCTT
ACCCGGGATG GGGATTTCAG TACCAAGGAC ATTGGCAAGG TGACGTATGG ATTGGGGTAC
AGCTTCAATC TGTTGATGGC GGTGTTTGTT GAAGCGCCGT GGGCGATTAT CCGTACGGCC
AAGCCACTGG TTATTGGCGG GTATGACGTG GGCATTCTTG ATAAGTCGGC AGCTTATTGG
AAAGCACGGG GTAATGCAGT CTGGGGTGAT GCGATACGCG GGTTCAGGGG CTCGATGGTG
GCGATGGGTG GGTTTGGGCT AGCGGCGGTT ACGCTTGAAC TATTTGATGT TATAGATGAT
TTTTTCGCAG CGAAAACATC AGAGGAAACA TATGGGATTG GCATTAAGGG TTTTTCTGTA
CTGGTGATGG GATTGGGGGC TGCCGCCCAG CTAATGGCAG GCATTTCCCC CGCTGGCGTC
TTTACGATTA TCGCAATGAG TCCGTGGTTC AGCGTAGCTC TGCTGGCAAC TGGTTTTATT
TATCTCCTTG CTACGATGGC ACTGAATTAC TTCAAGCAAG ACAGTGTCGG CTGGTGGCTA
CGCAAGTGCT GTTGGTCCAG TACCTTAGAC TATCGCTACG CCGAGACTAC CGATGGCGAG
CATGAAGAAG TGCGCGCGCT GATGGAAATT CAATTATCTC CGCAGGTTCA TGTAAAAAGC
ACAGTGAATT ATGAAAATCG TTATCTTGGC AAAGGCGATT ATTACAGCGT AGCGGTACAA
AATGGTGCTG GAGTACAAGT GCGATTGCCA AACGTGTTAC GCGGGCAGAC CGTGCATTTC
AATGTCATCA GCAGCAAGCG ACCATTGGGC GTGCTGACTG TAGAAAAAAT AGACCAGCCA
ATATATGAAG CTTTTTTGGA CCGCGGGCAA TTCAGGAACA CCGAACAGTT CGGGACGCTT
ACCAACAAGC CTGCTGGCAA GGCGAGTGAA GACTTTACCT ACCCCCGCAT GCCACCTGAA
AACGAAGACC TCATCTGGGA AACCTGGGTG CCGCTGGACA AGGACGCAAC GTATCTTGAG
TTGCAAATCT GGTACCCGGC CAATTTTTTA AATCCTGGCG GAGACGATAG AAGCTATCTG
TTTCAGATGG AGCTTGGTAT ACGAGGCGAT ACCGCTATTG ACGGCTTGGC TGCTGTGGAG
CTCGAGGTAA AGGCATCAAG CAGGATTGGC GCTTTGACCC TGGAAGTCGC AGAGGGCACA
CCTGTATGA
 
Protein sequence
MPVAAQRISR MTDKNGTHRQ RRAALFPKTP ATATSLCPFR GPNIAIVPVR YALDRSRYDA 
DPTQLKPLPK DGQWARLPTL KTRSYTLRQL YDGYVYVFDE TAGTLHEYAA SASDGHLSRI
VWSDAHIGND QRTGADEGQP FLLYPREHRL HIAFSPMQWT WRMCEHMRSH APSRALWMKA
LDLASYCLTM AEPDTLPLDR IAEAVADIDK DCVVEDGRFA DSAIPSVRPP SEGAEPDPLW
APLGADVFWQ GSVYDQDSSL VIALDDPLAV FNDLGMQLAA DQAAFREWQS AHEHKIQIAQ
TVATLCGAES EAEKLPASVR GDALRTHQYL SEVEAYFEQC ILEEAQISSS NVPGDFLLLP
DMFKSLDMRK SIETRYGSAP TDEGAQAWKD RHKWRREVDL SSARQYLLQH LPTGDKRLQQ
VRDTQSDFQH WAAHIGTEPL KLFIDTTHPK TLLYLQTIML NLQIIYAQDS AANAWLAEQE
ANTSSLFGTL RYGFSPALKH ALHQEADALL NGLGDVTNLA TRIGELNGVL NHRGFADKPW
MKALKQPVQD TFKALGELAS GAGKARFESV LLAWVPIDSR MALGKQQNIV ALLRTLLIGQ
ILLDSTARVA INEQTVTKLK QWVSEWQVLN KQISELVRSW QYPNAYNTRQ STARKLQAHK
HKLRVHELSI PALLDFQNNE YAKLLQDEIR QYFQSGKTLA KDWLARARGW TDRLGGTAGS
ITSGVVMLNL INTAFLYRDL TRDGDFSTKD IGKVTYGLGY SFNLLMAVFV EAPWAIIRTA
KPLVIGGYDV GILDKSAAYW KARGNAVWGD AIRGFRGSMV AMGGFGLAAV TLELFDVIDD
FFAAKTSEET YGIGIKGFSV LVMGLGAAAQ LMAGISPAGV FTIIAMSPWF SVALLATGFI
YLLATMALNY FKQDSVGWWL RKCCWSSTLD YRYAETTDGE HEEVRALMEI QLSPQVHVKS
TVNYENRYLG KGDYYSVAVQ NGAGVQVRLP NVLRGQTVHF NVISSKRPLG VLTVEKIDQP
IYEAFLDRGQ FRNTEQFGTL TNKPAGKASE DFTYPRMPPE NEDLIWETWV PLDKDATYLE
LQIWYPANFL NPGGDDRSYL FQMELGIRGD TAIDGLAAVE LEVKASSRIG ALTLEVAEGT
PV