Gene PSPTO_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1896 
Symbol 
ID1183541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2072111 
End bp2072656 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID637393274 
Productcytochrome b561 family protein 
Protein accessionNP_791719 
Protein GI28869100 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.832729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGG TCTCCCTGCG CCTGTGGGAC CCGCTGGTCA GGCTATTTCA CGTCTCGATC 
GCGGGTGTTT TCGTTGCCAA TTATTTCTTC AATGAAGCGG GCGACGACTG GCACATCTGG
CTGGGCTATT ACGCGGTTGC CTGGCTGGCG GTGCGAGTGG TGTGGGGTTT CCTCGGGCCG
ACCAGCGCCC GTTGGAGCGA TTTCTGGCCG AGCCCTGCGC GTTTGCGCGC GCATGTTCGC
TCGCTGATAG ACCGCAAGCC GGTCCACCGG CTCGGTCATT CTCCGCTCGG CGCGCTGGTC
ATGGTACTCA TGATGGCGCT GATTTTCGGC ATGGGCCTGA CCGGTTTCCT GATGGAGGAG
GTCGATGCCC TGTGGGGGGC CGACTGGCCT TTGCAGACCC ATGAAATCCT CGCCAATACG
TTGTGTGCCC TGGTGGTGCT GCACATGGCC GCAGCCATCT TCGAAAGTTT TCAAGTGCGT
GACAACCTGC CGTTGTCGAT GCTGACAGGA AAACGACGTC CGTTGCCTGA AGATGACTAT
CGCTGA
 
Protein sequence
MSRVSLRLWD PLVRLFHVSI AGVFVANYFF NEAGDDWHIW LGYYAVAWLA VRVVWGFLGP 
TSARWSDFWP SPARLRAHVR SLIDRKPVHR LGHSPLGALV MVLMMALIFG MGLTGFLMEE
VDALWGADWP LQTHEILANT LCALVVLHMA AAIFESFQVR DNLPLSMLTG KRRPLPEDDY
R