Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1896 |
Symbol | |
ID | 1183541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2072111 |
End bp | 2072656 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393274 |
Product | cytochrome b561 family protein |
Protein accession | NP_791719 |
Protein GI | 28869100 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.832729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGG TCTCCCTGCG CCTGTGGGAC CCGCTGGTCA GGCTATTTCA CGTCTCGATC GCGGGTGTTT TCGTTGCCAA TTATTTCTTC AATGAAGCGG GCGACGACTG GCACATCTGG CTGGGCTATT ACGCGGTTGC CTGGCTGGCG GTGCGAGTGG TGTGGGGTTT CCTCGGGCCG ACCAGCGCCC GTTGGAGCGA TTTCTGGCCG AGCCCTGCGC GTTTGCGCGC GCATGTTCGC TCGCTGATAG ACCGCAAGCC GGTCCACCGG CTCGGTCATT CTCCGCTCGG CGCGCTGGTC ATGGTACTCA TGATGGCGCT GATTTTCGGC ATGGGCCTGA CCGGTTTCCT GATGGAGGAG GTCGATGCCC TGTGGGGGGC CGACTGGCCT TTGCAGACCC ATGAAATCCT CGCCAATACG TTGTGTGCCC TGGTGGTGCT GCACATGGCC GCAGCCATCT TCGAAAGTTT TCAAGTGCGT GACAACCTGC CGTTGTCGAT GCTGACAGGA AAACGACGTC CGTTGCCTGA AGATGACTAT CGCTGA
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Protein sequence | MSRVSLRLWD PLVRLFHVSI AGVFVANYFF NEAGDDWHIW LGYYAVAWLA VRVVWGFLGP TSARWSDFWP SPARLRAHVR SLIDRKPVHR LGHSPLGALV MVLMMALIFG MGLTGFLMEE VDALWGADWP LQTHEILANT LCALVVLHMA AAIFESFQVR DNLPLSMLTG KRRPLPEDDY R
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