| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1891 |
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| Symbol | pcD |
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| ID | 1183536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2066812 |
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| End bp | 2068302 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393269 |
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| Product | piperideine-6-carboxylate dehydrogenase |
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| Protein accession | NP_791714 |
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| Protein GI | 28869095 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCCG AGTTATTAGC ACGTCTGGGC GTGGCGAACA GTGCCCACAC ACAAGGGGAC
TATCCGGTTT ACACCCCGAT TGATGGCAGC CAGATTGCCT CGGTCACCCT GGAAAACGAG
GCGCAGGTGG TGGCGCGCAT CGACAGCGCC CACAGCGCAT TCCTGAAGTG GCGCACCGTA
CCGGCCCCGC GCCGTGGCGA GCTGGTGCGG ATCTTTGGTG AAGTGCTGCG CGAGCACAAG
GCTGACCTTG GCGAACTGGT GTCGGTCGAG GCGGGCAAGA TCACTCAGGA AGGTCTGGGT
GAAGTGCAGG AAATGATCGA CATCTGCGAC TTCGCCGTCG GCCTGTCGCG TCAGTTGTAC
GGCTTGACCA TCGCTTCCGA ACGTCCTGGC CATCATATGC GTGAAACCTG GCATCCGCTG
GGCGTGGTCG GCGTGATCAG CGCTTTCAAC TTTCCGGTCG CGGTCTGGGC ATGGAACACC
ACGCTGGCGC TGGTCTGCGG CAACCCGGTG ATCTGGAAAC CGTCGGAAAA AACGCCGTTG
ACCGCGCTGG CGTGCCAGGC GCTGTTCGAC AAGGCGCTGA CGATTTTCGG TGACGCACCG
GCCGCGTTGG CGCAGTTGGT CATTGGTGAT CGTGACGCCG GTGAAGCGCT GGTCGATGAC
CCGCGCGTGC CCCTGATCAG CGCCACCGGC AGCACCCGCA TGGGCCGCGA AGTCGGTCCG
CGGGTTGCCG CACGTTTCGG CCGCACTATT CTGGAACTGG GCGGCAACAA CGCGATGATT
CTGGCCCCCA GCGCCGATCT GGACCTGGCC GTGCGCGGCA TTCTGTTCAG CGCCGTGGGC
ACCGCCGGTC AACGCTGCAC CACGCTGCGC CGTCTGATTG TGCACCGTTC GATCAAGGAT
GAAGTGGTCG CCTGCGTCAA AGCGGCCTAC GCCAAGGTGC GTGTCGGTGA CCCGCGCGAA
GGCAATCTGA TCGGCCCGCT GATTGATCAA CAGGCGTTCT CGGCCATGCA GAACGCCCTG
ACCAAGGCCC GTGACGAGGG CGGTCAGGTG TTCGGCGGCG AGCGTCAATT GCAGGATAAA
TACCCGAACG GCTATTACGT CACGCCGGCC ATCGCCGAAA TGCCGGGTCA GACCGAGGTC
GTCCGTCACG AAACCTTCGC GCCGATTCTT TACGTACTGG CTTATGACGA CTTTGAAGAA
GCCTTGCGCC TGAACAACGA AGTGCCACAA GGCCTGTCGT CGTGCATTTT CACCACTGAC
CTGCGCGAAG CCGAGGCTTT CCAGAGTGCG GCGGGCAGCG ACTGTGGCAT CGCCAACGTC
AACATCGGCA CCAGCGGCGC AGAAATCGGC GGCGCGTTCG GTGGCGAGAA AGAAACCGGC
GGCGGTCGCG AATCAGGCTC CGATTCGTGG CGCGCCTACA TGCGTCGGCA AACCAACACC
GTCAACTATT CCCGCGAGCT GCCACTGGCT CAGGGCATCG TTTTCGACTG A
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| Protein sequence | MVAELLARLG VANSAHTQGD YPVYTPIDGS QIASVTLENE AQVVARIDSA HSAFLKWRTV
PAPRRGELVR IFGEVLREHK ADLGELVSVE AGKITQEGLG EVQEMIDICD FAVGLSRQLY
GLTIASERPG HHMRETWHPL GVVGVISAFN FPVAVWAWNT TLALVCGNPV IWKPSEKTPL
TALACQALFD KALTIFGDAP AALAQLVIGD RDAGEALVDD PRVPLISATG STRMGREVGP
RVAARFGRTI LELGGNNAMI LAPSADLDLA VRGILFSAVG TAGQRCTTLR RLIVHRSIKD
EVVACVKAAY AKVRVGDPRE GNLIGPLIDQ QAFSAMQNAL TKARDEGGQV FGGERQLQDK
YPNGYYVTPA IAEMPGQTEV VRHETFAPIL YVLAYDDFEE ALRLNNEVPQ GLSSCIFTTD
LREAEAFQSA AGSDCGIANV NIGTSGAEIG GAFGGEKETG GGRESGSDSW RAYMRRQTNT
VNYSRELPLA QGIVFD
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