| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1883 |
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| Symbol | |
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| ID | 1183528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2056905 |
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| End bp | 2057831 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393261 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791706 |
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| Protein GI | 28869087 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.49643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC GTATCCCGCC GCTTTACGCG CTGAGAGCCT TTGAAGTAGC GGCTCGATCA
TGCTCGTTTA CGCGTGCTGC GCAGGAATTG TCGCTGACCC AGAGCGCCAT TAGCCGCCAT
ATTCGTACGC TGGAAGAAAC CCTCGGCTGC CGATTGTTCG AGCGCAATGG CCCACGGCTT
TCGTTGAGTG ACGAGGGGCG GCGGTTGTCG AGTCAGCTCA AGATCGGCTT CCGGATCATC
GAAGACGCTT GTCAGCCCTT CCGGGGTCAG GGCGCGAATT TGCGCCTCAA GTCACCGTCT
ACCCTGACCA TGAGATGGTT GCTGCACGCA CTGGAATCCT TTAAACGACC CGCGCCCGCC
CTGCCGGTCC AGCTTTCCAG CGTGTGGATG GACTTTGACA GCGTGGACTT TTACTCGGAG
CCGTTCGACT GCGCGATTCT GCTGGGCAAT GGCAGCTTTG GTGCCGAGGT GGAAACCTGC
AAGCTGTTCG ATGAATGGCT GATTCCGATC TGCTCGGCAG ACACTTTGGG CGATCAGCCG
TGGGGAACGG AGCGTTTGCA GGCGGCTGAA CTCATTCATC CGTCCAGTGA CCGTCGCGAC
TGGCGGCGCT GGTTGAACCG GATGGATCTG GCCGGTCAGG TGACATTGAG CAAAGGCAAG
GTGTTCGACA CGCTCGATCA GGGCATTACG GCTGCTGTCA GGGGGCATGG GGTGTCGATT
GGCGATCTGT TTCTGGTCGC TGATGACCTG AACGAGGGGC AGGTGTTTTT GCCGTTCAAT
GCGGCGGTTG GCACCGGGGA CGCCTATTAC CTGGTCTGGT TGCAGGACAG TTTCAAGCGC
CAGCGGGTAC TGGAACTGCG TGACCACCTG CTGACCTGCC TGCCGGACAT CTCCAGTATT
GAAGTGCAAT TGCTCACTGC GCCTTGA
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| Protein sequence | MTERIPPLYA LRAFEVAARS CSFTRAAQEL SLTQSAISRH IRTLEETLGC RLFERNGPRL
SLSDEGRRLS SQLKIGFRII EDACQPFRGQ GANLRLKSPS TLTMRWLLHA LESFKRPAPA
LPVQLSSVWM DFDSVDFYSE PFDCAILLGN GSFGAEVETC KLFDEWLIPI CSADTLGDQP
WGTERLQAAE LIHPSSDRRD WRRWLNRMDL AGQVTLSKGK VFDTLDQGIT AAVRGHGVSI
GDLFLVADDL NEGQVFLPFN AAVGTGDAYY LVWLQDSFKR QRVLELRDHL LTCLPDISSI
EVQLLTAP
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