| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1878 |
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| Symbol | |
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| ID | 1183523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2051139 |
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| End bp | 2051957 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637393256 |
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| Product | ISPsy11, transposase OrfB |
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| Protein accession | NP_791701 |
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| Protein GI | 28869082 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0252583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGTTC ATGGGTATTT CGCGCCAAGC GTATTACAAG CGTATTACAA GCGTAATCGC
GCTTTTGACG CGAGAGTCTG CCAAGACCAA GAGGTGGTGG ACTTCGTCCT GGAAAAGCGG
CGTCGCCAGC CCAAGTTGGG AACGCGCAAG CTGCACTACT TGATGAGCGT CGAAGCTCCT
GCGTCGTCGT GCGTGGGTAG AGATCGTATG TTTACTATCC TTCGTGGTGC GCGCGAGCTG
GTTCCGCGTA AACGGGCTTA TCACAAGACC ACTCATAGCC ATCATCGCTT CCGTCGCCAC
CCCAACCTGC TCAAAGCAGG TCCAGAACAA GTCGTGGCCA ATGGACCCGA ACAGGTCTGG
GTTGCAGACA TAACCTATCT GCCTACGCAG GAAAGCGTGG CCTACGTGAG CCTTGTGACA
GATGCGTACT CACGTAAGAT CGTTGGCCAT CACGTGCATG AGAGCCTGCA TGCCCAATCG
GTGATGAAGG CACTGGAAAA AGCGGTAGGA GAGCGAAAAA CCGATCAGAT GCTGATTCAT
CATTCAGATC GCGGCGCCCA GTACTGCTCC GATCTCTATC AGCAGCTGCA TACCAGGCAT
GGAATCCGGT GCTCGATGAC TGATGGCTAT GACTGTTATC AGAACGCTAT GGCCGAGCGA
GTAAACGGGA TTTTGAAGAC CGAGTTTCTA CTCCATCGGC CTAAAGACTT GGCAGATGCA
GTGAAAATGG TTGACGAATC GGTGCAGATC TACAATGGGG AGCGGCCACA CTTATCCCTG
AAATACAAAA CGCCAGATGC GGTGCATCGG GCGTTTTGA
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| Protein sequence | MPVHGYFAPS VLQAYYKRNR AFDARVCQDQ EVVDFVLEKR RRQPKLGTRK LHYLMSVEAP
ASSCVGRDRM FTILRGAREL VPRKRAYHKT THSHHRFRRH PNLLKAGPEQ VVANGPEQVW
VADITYLPTQ ESVAYVSLVT DAYSRKIVGH HVHESLHAQS VMKALEKAVG ERKTDQMLIH
HSDRGAQYCS DLYQQLHTRH GIRCSMTDGY DCYQNAMAER VNGILKTEFL LHRPKDLADA
VKMVDESVQI YNGERPHLSL KYKTPDAVHR AF
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