Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1877 |
Symbol | |
ID | 1183522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2050724 |
End bp | 2051125 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393255 |
Product | ISPsy11, transposase OrfA |
Protein accession | NP_791700 |
Protein GI | 28869081 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.137116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCGG GTAAAAGGCG CAGCCAGCGC GATTACACGC TAGCCTTTAA ATTATCGGTC GTAGATCAGG TTGAAAAAGG CGAGTTGAGT TATAAAGAAG CCCAACGACG CTATGGCATC CAAGGCCGGT CGACGGTGCT GGTCTGGTTA CGAAAGCACG GTCGACAGGA TTGGAGCCAA GGCGCATCAA TTCGAGAGCA GAGGAGCAGG TCCATGACCG AGCCAACCCT CCCGCCGACA CCCGAGCAGC GGATTAAAGA GCTTGAAGAA CAGCTGGAGC TGAGCAATCA GAAGGCTCAG TTCTTTGAAG CCGTCGTCAA CGTTCTGAAA AATGACTACG GCGTTTCTGT CGTAAAAAAG CCACCCGGCA AGTCCTCTCG CAAGGGCAAA TCCAAGACCT GA
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Protein sequence | MDSGKRRSQR DYTLAFKLSV VDQVEKGELS YKEAQRRYGI QGRSTVLVWL RKHGRQDWSQ GASIREQRSR SMTEPTLPPT PEQRIKELEE QLELSNQKAQ FFEAVVNVLK NDYGVSVVKK PPGKSSRKGK SKT
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