Gene PSPTO_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1877 
Symbol 
ID1183522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2050724 
End bp2051125 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content53% 
IMG OID637393255 
ProductISPsy11, transposase OrfA 
Protein accessionNP_791700 
Protein GI28869081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGG GTAAAAGGCG CAGCCAGCGC GATTACACGC TAGCCTTTAA ATTATCGGTC 
GTAGATCAGG TTGAAAAAGG CGAGTTGAGT TATAAAGAAG CCCAACGACG CTATGGCATC
CAAGGCCGGT CGACGGTGCT GGTCTGGTTA CGAAAGCACG GTCGACAGGA TTGGAGCCAA
GGCGCATCAA TTCGAGAGCA GAGGAGCAGG TCCATGACCG AGCCAACCCT CCCGCCGACA
CCCGAGCAGC GGATTAAAGA GCTTGAAGAA CAGCTGGAGC TGAGCAATCA GAAGGCTCAG
TTCTTTGAAG CCGTCGTCAA CGTTCTGAAA AATGACTACG GCGTTTCTGT CGTAAAAAAG
CCACCCGGCA AGTCCTCTCG CAAGGGCAAA TCCAAGACCT GA
 
Protein sequence
MDSGKRRSQR DYTLAFKLSV VDQVEKGELS YKEAQRRYGI QGRSTVLVWL RKHGRQDWSQ 
GASIREQRSR SMTEPTLPPT PEQRIKELEE QLELSNQKAQ FFEAVVNVLK NDYGVSVVKK
PPGKSSRKGK SKT