| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1870 |
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| Symbol | |
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| ID | 1183515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2043345 |
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| End bp | 2045420 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393248 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_791693 |
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| Protein GI | 28869074 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG ATGTTTCCGG CGGCAGATCG TTTGCCCCTC AAGTACCCCG TCCCTCGGCG
CATGAAGCTG CTGAAAGGCT GCAACTCGCC CTGGATTCAG GCGCGGTTGC CGGCACGTGG
GTGTGGGACA TCATTGCTGA TCAACTGACC GGTGACGAGT GGTTTGCCCG CACATTCGGT
TTGTGCCCCA AGCTGTGCGC CAAAGGGTTG CCGCTGGCGT TGGTGACCGC GTCCATTCAC
CCGGACGACG CGCTCAGGGT CGACAAGGAT ATCGAGGAGG CGCTGTCCAA CGGCGATACC
TATCGATGCG AGTATCGGGT GCTTCATCAG GACGGTGTCT ATCGCTGGGT TGAAGCCAGT
GGCCGGATCG AGCGTGATGT TCAGGGCAAG CCGATTCGCA GCCCTGGTGT GCTGCTCGAC
ATAGACAGCC GACGCACTGC CGAGGCAGAG CGAGACCGTC TCAACGAACT GCTGCAGATA
TTCACCGCTG CCGTCCCGGG TGTCGTGTAT GCCAAGGATC TGGAAGGCCG AATGCTCGTC
GCCAACCGTG GCACCGCCGA ACTGGTCGGC AAGCCGCCGG AATTCTTCAT CGGCAAGACC
GATCTGGAGT TTCTGGATGA TGAGCAACAG GCGCGCGTCC TCATGGAAAC TGATCAGCGG
ATCATGCAGA GCAACGTCAG CGAACAGATA GAAGAGAAGG TCAATCTGGC GGATGGCTCC
GCTGCAATAT GGTTGTCCAC CAAGGCCCCG CTGCTCGATC GCAACGGCGA CGTTATCGGC
CTGATCGGCT CTTCCATCGA CGTAACGGCA CGAAAGAAAG CCGAAGAAGC GGTCAGGGAA
CTCAATCAGA CACTGGAACA ACGCATCGAG CAGGCCGTTT TCGAGCGTGA GCAGATCGAG
GATGCCCTGC GCCATTCGCA GAAGATGGAC GCCGTCGGGC AATTGACGGG TGGCATCGCA
CATGACTTCA ACAACCTGTT GGCCGGTATC TCGGGCAGCC TGGAACTGAT TACCAAACGA
CTGGCTCAGG GACGCGTCAG TGACGTGGAC CGTTATGTGT CAGTCGCCCA GGGCGCGGTG
CGTCGCGCAG CTTCACTGAC TCACCGCCTG CTGGCCTTTT CCAGGCGCCA GACCCTGTCG
CCGAGAGTGA CCGACGTAAA CGTGCTTATT CATGACATGG AAGAAATGAT CGCGCGCACG
GTCGGCCCGG AAATAGACAT CAAAGTGGTC GCCCAGAATG ATCTGTGGCC AGCCTTGATC
GACCATGCCC AACTGGAAAG CTCGCTGCTG AACCTGTGCC TGAATGCCCG TGATGCGATG
CCCAATGGCG GGCACATCGT CATTGAAACC GCAAACGCTT CGCTCGCCGA GTGTAACGAC
CCGGACCACG GCATTCCTGC CGGTGAACAC CTGAGCATCC GTATTACCGA CACCGGCAGC
GGCATGAGCC CGGCGATAGT CGCCAAGGCC TTCGAGCCAT TTTTCACCAC CAAACCCATT
GGTGCAGGTA CCGGCCTGGG ACTGTCGATG GTGTATGGTT TTGTACGCCA GTCCGGCGGG
CAGATCCGGG TTGAATCGGT CGAAGGCCAG GGCACCAGCG TGGTGATGCA CCTGCCGCGC
CATACGTCCG AAAGCACTCC GCGCGCGGCC GAACCCGAAG TCTTCGAAGA GCCGGCGCAT
CACACCGGTG AAACCGTACT CATCGTCGAT GACGAATCCT CCGTGCGGAT GCTCGTTGCC
GAAGTGATTA CCGGGCTGGG CTTCAACTGC CTGGAAGCAG CCGATGCTCA GGCCGGGCTG
CAGATTCTGC AATCCGACGC CCGCATCGAC CTGCTGATCA GCGACATAGG GCTGCCGGGT
GGTATGAATG GCCGCGAAAT GGCCGATGCC GCAGGCGATT GCCGACCCGG TCTGCCGACA
TTGTTCATCA CCGGCTACGC GAAAAGCTCC GTGCTGGACG ACTGCCACCT GCGGCCCTGC
ACGCAAGTAT TGACCAAGCC ATTCGGGCTG GACGCGCTCG CCGGACGAGT CACCGGGCTG
ATTGGCGCTG ACGCCGTGGC ACGGGGTTAT CAGTAG
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| Protein sequence | MSNDVSGGRS FAPQVPRPSA HEAAERLQLA LDSGAVAGTW VWDIIADQLT GDEWFARTFG
LCPKLCAKGL PLALVTASIH PDDALRVDKD IEEALSNGDT YRCEYRVLHQ DGVYRWVEAS
GRIERDVQGK PIRSPGVLLD IDSRRTAEAE RDRLNELLQI FTAAVPGVVY AKDLEGRMLV
ANRGTAELVG KPPEFFIGKT DLEFLDDEQQ ARVLMETDQR IMQSNVSEQI EEKVNLADGS
AAIWLSTKAP LLDRNGDVIG LIGSSIDVTA RKKAEEAVRE LNQTLEQRIE QAVFEREQIE
DALRHSQKMD AVGQLTGGIA HDFNNLLAGI SGSLELITKR LAQGRVSDVD RYVSVAQGAV
RRAASLTHRL LAFSRRQTLS PRVTDVNVLI HDMEEMIART VGPEIDIKVV AQNDLWPALI
DHAQLESSLL NLCLNARDAM PNGGHIVIET ANASLAECND PDHGIPAGEH LSIRITDTGS
GMSPAIVAKA FEPFFTTKPI GAGTGLGLSM VYGFVRQSGG QIRVESVEGQ GTSVVMHLPR
HTSESTPRAA EPEVFEEPAH HTGETVLIVD DESSVRMLVA EVITGLGFNC LEAADAQAGL
QILQSDARID LLISDIGLPG GMNGREMADA AGDCRPGLPT LFITGYAKSS VLDDCHLRPC
TQVLTKPFGL DALAGRVTGL IGADAVARGY Q
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