| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1859 |
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| Symbol | |
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| ID | 1183504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2033359 |
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| End bp | 2033904 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637393238 |
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| Product | isochorismatase family protein |
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| Protein accession | NP_791683 |
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| Protein GI | 28869064 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.188481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGAG GCCTCGTAGT TGTTGATCTG CAAAACGAAT ACCTGCCGAC CGGCAAGTTG
CCGTTGTCCG GGATCGAAGC CGCTGCGGCG AATGCCAGCC GAGTGATCAG CCACGCGCGT
GATACCGGTA TTCCGGTTTT CCACATACGC CATGAATCCG ATAATGAGGG TGCCGCGATA
TTCACCAAAG GATCCGACGG AACGCAAATA CAGCCCGCTG TAGCGCCGGT GGGTCAAGAA
CCCGTGATCA CTAAAAATCA TATCAATGCC TTCAGAGACA CGGACCTCAA GACGCAGCTG
GATACGTTCG ATATCGAGGA TATTGTCGTC ATTGGTGCCA TGAGCCACAT GTGCATCGAC
GCTGTAGTGC GTGCAGCGGC GGACATGGGT TATCCGGTTA CTGTGCTGCA TGATGCGTGC
GCTACGCTGG ATCTCACCTT TGGCGGAGTC ACCGTGCCTG CCGCTCAAAC GCATGCGGCG
ATGATGGCAG CCTTTGAGTT CGGCTACGCC GCCGTCAAAT CGGTGGACGA TTACCTCTCG
GCTTGA
|
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| Protein sequence | MKRGLVVVDL QNEYLPTGKL PLSGIEAAAA NASRVISHAR DTGIPVFHIR HESDNEGAAI
FTKGSDGTQI QPAVAPVGQE PVITKNHINA FRDTDLKTQL DTFDIEDIVV IGAMSHMCID
AVVRAAADMG YPVTVLHDAC ATLDLTFGGV TVPAAQTHAA MMAAFEFGYA AVKSVDDYLS
A
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