| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1858 |
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| Symbol | |
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| ID | 1183503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2032383 |
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| End bp | 2033264 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637393237 |
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| Product | hypothetical protein |
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| Protein accession | NP_791682 |
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| Protein GI | 28869063 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00276087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCA CAACACTTCC TCTTGCGCTC AGCATTGCTT GCGCTGCGGC CATCACACCT
GCCTTCGCGG GCACAAGCGT CTCTGAGGCT TCACACAAAG TGAATGTGCA GCAAGTTCGT
AACGCGACGG TAAAGATCTC CTACGGCGGC ACGACCTTTC TGATCGACCC GATGCTGGCC
AAAAAGGGAA CCTACCCAGG GTTTGAAAAT ACCTATCGAA GCAATCTGCG CAATCCACTG
GTTGATCTGA CCGAATCGCC CACCGAAGTG ATCGCCGGTA TCGACGCAGT TATCGTCACT
CATACGCACC TTGACCATTG GGACGATGCT GCACAAAAAG TGCTGCCTAA AGACATCCCT
CTGTTCACCC AGCATGAAAA AGACGCGCAG CTGATTCGCT CTCAAGGTTT CAAGAACGTA
CGCGTATTGA CTGATGAAGC CGAATTCGGC GGCGTCAAAA TTACCAAGAC CGGTGGGCAG
CATGGCACCG ACGAAATGTA TGCCGTGCCA GCCCTCGCGA AGCCTCTGGG TGAAGCAATG
GGCGTTGTAT TTCAAGCCCC GGGCTACAAG ACCCTCTACC TCGCTGGTGA CACTGTCTGG
CGTAAAGAGG TCGATCAGGC TATCGAGAAC TATTGTCCCG AAGTCATCGT ACTCAATGCC
GGCAAAGCAA AAATGACGGG GTATGAGGGG GCGATCATCA TGGGGGAAGA GGATGTACTG
CGCGCTTCAC AGGTCGCGAA GAACGCGAAA ATCGTCGCTG TACACATGAA TGCAATCAAC
CATATGTCCC TGACCCGTGA GCAATTGCGC GCTTACGTCA AGCAGCAGGG TATCGAAAGT
CGTGTAGACA TACCGGAAGA TGGCGCTTCA CTGGAGTTCT GA
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| Protein sequence | MNLTTLPLAL SIACAAAITP AFAGTSVSEA SHKVNVQQVR NATVKISYGG TTFLIDPMLA
KKGTYPGFEN TYRSNLRNPL VDLTESPTEV IAGIDAVIVT HTHLDHWDDA AQKVLPKDIP
LFTQHEKDAQ LIRSQGFKNV RVLTDEAEFG GVKITKTGGQ HGTDEMYAVP ALAKPLGEAM
GVVFQAPGYK TLYLAGDTVW RKEVDQAIEN YCPEVIVLNA GKAKMTGYEG AIIMGEEDVL
RASQVAKNAK IVAVHMNAIN HMSLTREQLR AYVKQQGIES RVDIPEDGAS LEF
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