Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1841 |
Symbol | |
ID | 1183482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2009291 |
End bp | 2010295 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393216 |
Product | threonine aldolase, low-specificity |
Protein accession | NP_791665 |
Protein GI | 28869046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTCA TCGATCTGCG CAGCGACACA GTGACTCTGC CCACCGCAGG CATGCTTGAC GCCATGGCAC ATGCGCCGGT GGGCGATGAT GTCTACGGTG AAGACCCTAC GGTCAATCTG CTCGAGGCCA CGCTCGCCGA GCGCCTCGGG TTCGACGCCG CCTTGTTCGT GCCCTCCGGC ACCATGAGCA ATCTGCTGGC GTTGATGGCG CACTGTGAGC GGGGCGATGA ATACATCGTC GGTCAGCAGG CCCACACCTA TAAATACGAA GGGGGTGGCG CGGCGGTACT GGGCTCGATT CAGCCTCAGC CGCTGGACGT GCAGGCGGAC GGTTCGCTGA GCCTGCAACA GGTGCTCGAC ACCATCAAGC CGGACGACTT CCACTTTGCC CGCACACGCC TGCTGGCCCT GGAAAACACC ATGCAGGGCA AGGTGCTGCC GCTTGAGTAC CTGGCCGCCG CGCGCAAGCT GACCCTGGAA AAAGGCCTCG CGCTGCACCT CGACGGCGCG CGGCTGTACA ACGCGGCGGT CAAGCTGGGC GTTGATGCCC GGGAGATCAC CCGGCACTTC GATTCAGTCT CCATCTGCCT ATCCAAAGGC CTGGGCGCCC CCATTGGCTC GGTGCTGTGC GGCTCGCAGC CGCTGATGGT CAAGGCGCGG CGTCTGCGCA AGATGCTCGG CGGGGGCATG CGTCAGGCAG GCGGGCTGGC CGCTGCCGGG CTCTATGCGC TGGATCATCA GGTCCAGCGG CTGGCCGACG ATCATGCCAA TGCGGCGTTT CTGGCCGAGA GCTTGAGCGG GCTGGGTTAC AGTGTCGAGC CTGTGCAGAC CAACATGGTC TATGTGCAGA TCGGTGATCG CGCCGCAGCG CTCAAGGCAT TCTGCGCCGA GCGTGGCATC GTGCTCACTG CCGCGTCGCG GCTGCGCATG GTCACTCACC TGAATGTTTC GCGTGCTCAG GCAGAGCAAG TGATCGCGGC ATTCGCAGCC TTTGAACACC CATGA
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Protein sequence | MTVIDLRSDT VTLPTAGMLD AMAHAPVGDD VYGEDPTVNL LEATLAERLG FDAALFVPSG TMSNLLALMA HCERGDEYIV GQQAHTYKYE GGGAAVLGSI QPQPLDVQAD GSLSLQQVLD TIKPDDFHFA RTRLLALENT MQGKVLPLEY LAAARKLTLE KGLALHLDGA RLYNAAVKLG VDAREITRHF DSVSICLSKG LGAPIGSVLC GSQPLMVKAR RLRKMLGGGM RQAGGLAAAG LYALDHQVQR LADDHANAAF LAESLSGLGY SVEPVQTNMV YVQIGDRAAA LKAFCAERGI VLTAASRLRM VTHLNVSRAQ AEQVIAAFAA FEHP
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