Gene PSPTO_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1841 
Symbol 
ID1183482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2009291 
End bp2010295 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID637393216 
Productthreonine aldolase, low-specificity 
Protein accessionNP_791665 
Protein GI28869046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTCA TCGATCTGCG CAGCGACACA GTGACTCTGC CCACCGCAGG CATGCTTGAC 
GCCATGGCAC ATGCGCCGGT GGGCGATGAT GTCTACGGTG AAGACCCTAC GGTCAATCTG
CTCGAGGCCA CGCTCGCCGA GCGCCTCGGG TTCGACGCCG CCTTGTTCGT GCCCTCCGGC
ACCATGAGCA ATCTGCTGGC GTTGATGGCG CACTGTGAGC GGGGCGATGA ATACATCGTC
GGTCAGCAGG CCCACACCTA TAAATACGAA GGGGGTGGCG CGGCGGTACT GGGCTCGATT
CAGCCTCAGC CGCTGGACGT GCAGGCGGAC GGTTCGCTGA GCCTGCAACA GGTGCTCGAC
ACCATCAAGC CGGACGACTT CCACTTTGCC CGCACACGCC TGCTGGCCCT GGAAAACACC
ATGCAGGGCA AGGTGCTGCC GCTTGAGTAC CTGGCCGCCG CGCGCAAGCT GACCCTGGAA
AAAGGCCTCG CGCTGCACCT CGACGGCGCG CGGCTGTACA ACGCGGCGGT CAAGCTGGGC
GTTGATGCCC GGGAGATCAC CCGGCACTTC GATTCAGTCT CCATCTGCCT ATCCAAAGGC
CTGGGCGCCC CCATTGGCTC GGTGCTGTGC GGCTCGCAGC CGCTGATGGT CAAGGCGCGG
CGTCTGCGCA AGATGCTCGG CGGGGGCATG CGTCAGGCAG GCGGGCTGGC CGCTGCCGGG
CTCTATGCGC TGGATCATCA GGTCCAGCGG CTGGCCGACG ATCATGCCAA TGCGGCGTTT
CTGGCCGAGA GCTTGAGCGG GCTGGGTTAC AGTGTCGAGC CTGTGCAGAC CAACATGGTC
TATGTGCAGA TCGGTGATCG CGCCGCAGCG CTCAAGGCAT TCTGCGCCGA GCGTGGCATC
GTGCTCACTG CCGCGTCGCG GCTGCGCATG GTCACTCACC TGAATGTTTC GCGTGCTCAG
GCAGAGCAAG TGATCGCGGC ATTCGCAGCC TTTGAACACC CATGA
 
Protein sequence
MTVIDLRSDT VTLPTAGMLD AMAHAPVGDD VYGEDPTVNL LEATLAERLG FDAALFVPSG 
TMSNLLALMA HCERGDEYIV GQQAHTYKYE GGGAAVLGSI QPQPLDVQAD GSLSLQQVLD
TIKPDDFHFA RTRLLALENT MQGKVLPLEY LAAARKLTLE KGLALHLDGA RLYNAAVKLG
VDAREITRHF DSVSICLSKG LGAPIGSVLC GSQPLMVKAR RLRKMLGGGM RQAGGLAAAG
LYALDHQVQR LADDHANAAF LAESLSGLGY SVEPVQTNMV YVQIGDRAAA LKAFCAERGI
VLTAASRLRM VTHLNVSRAQ AEQVIAAFAA FEHP