| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1838 |
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| Symbol | astE |
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| ID | 1183479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2007120 |
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| End bp | 2008127 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393213 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | NP_791662 |
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| Protein GI | 28869043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCC TCGGCAAACT GCTTGAACTG ACCCTGGCTG GACGTGAACC AGCGGAAAAG
ACTCAACTGA CCGTCGAAGG CGTGCGGATG CGCTGGCTGG CTGAGGGGGC TCTGGAAGTC
CGCCCGCCAC AGGCTCGTGA CAATGGCACT GACCTGCTGC TGTCTGCCGG TATTCATGGT
AACGAGACAG CGCCCATCGA GCTGCTTGAT GAACTGATCC GCAGCATCGC GCGTGGCGAC
CTCAAACCGC GCGCACGTAT TCTGTTTCTG TTTGGCAACC CTGCTGCCAT GCGGCTGGGT
GCGCGTTATG TCGAGCAGGA CGTCAACCGG CTGTTCAATG GCCGGCACGA ACAAAGCGGT
GGCGCGGAAG CCCTGCGCGC TTGTGAACTG GAGCGGCTGG CTGCCAGCTT TTTCAGCCTG
CCGGACCGCT ATCGGCTGCA TTACGACCTG CACACTGCCA TTCGCGGCTC AAAGATCGAG
CAGTTTGCGC TGTATCCGTG GAAAGAGGGC CGTCAGCACT CACGCTTTGA ACTGGCCCGG
CTGCGTGCGG CGGGCATCAG TGCAGTGCTG CTGCAGAACA AACCCTCCAT AGTGTTCAGC
GCCTACACCT ACGAACAGCT CGGGGCCGAG GCTTTTACAC TGGAACTGGG CAAGGCCCGC
CCGTTTGGAC AGAACCGGCA CGTTAATCTC GCGCCATTGC GTTTGCGTCT GGAGCAGATC
ATTGAAGGCA GCGAACCCCA GCCGGATGAG CGTCTTGAGG GGCTGCAACT GTTCAGCGTC
GCACGTGAAG TGATCAAGCG CAGCGATGCG TTCACCTTCA ACCTGGCGGA TGATGTGGAG
AACTTCTCCG AGCTGGAAAA AGGCTACGTG CTGGCCGAAG ACGTGAGTGA TTCACGCTGG
GTGGTGAAAG AAGAGGGCGC AAGAATCATC TTCCCCAACC CCAAGGTCAA AAATGGCCTG
CGGGCGGGCA TTGTGATTGT GCCGGCTGAT GCGGATGGGC TTGGTTGA
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| Protein sequence | MLALGKLLEL TLAGREPAEK TQLTVEGVRM RWLAEGALEV RPPQARDNGT DLLLSAGIHG
NETAPIELLD ELIRSIARGD LKPRARILFL FGNPAAMRLG ARYVEQDVNR LFNGRHEQSG
GAEALRACEL ERLAASFFSL PDRYRLHYDL HTAIRGSKIE QFALYPWKEG RQHSRFELAR
LRAAGISAVL LQNKPSIVFS AYTYEQLGAE AFTLELGKAR PFGQNRHVNL APLRLRLEQI
IEGSEPQPDE RLEGLQLFSV AREVIKRSDA FTFNLADDVE NFSELEKGYV LAEDVSDSRW
VVKEEGARII FPNPKVKNGL RAGIVIVPAD ADGLG
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