| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1835 |
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| Symbol | astD |
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| ID | 1183476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2003866 |
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| End bp | 2005332 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393210 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | NP_791659 |
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| Protein GI | 28869040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCC TGTATATCGC AGGTGCCTGG CAAGCCGGGC AGGGCGAGCT GTTCCATTCG
TTGAACCCGG TGACCCTGCA CGTGTTGTGG TCCGGGCAAG GCGCGACCGC TGAACAGGTG
GATCACGCTG TACAGGCCGC GCGCCAGGCG TTTCCCGCCT GGGCGCTGCT TTCACTTGAT
CAGCGCATCG CCGTGCTGGA CGCTTTTGCT GTCAGCCTCA AGGCGCACGC TGACGAACTG
GCGAATTGCA TCGGTGAAGA AACCGGCAAG CCGTTGTGGG AATCGGCGAC CGAGGTGACC
AGCATGGTCA ACAAGATCGC CATTTCAGTG CAGAGCTATC GCGAAAGAAC CGGCGAGAAA
AGCGCTCCGC TGGGCGATGC TACCGCTGTG TTGCGCCACA AGCCGCACGG TGTGGTTGCC
GTATTCGGGC CGTACAACTT TCCGGGCCAC CTGCCTAACG GCCATATCGT CCCGGCCTTG
CTGGCAGGCA ATACGGTGCT GTTCAAACCG AGCGAGCTGA CGCCGAAAGT CGCCGAACTG
ACCGTCAAAT GCTGGATCGA AGCCGGCTTG CCTGCCGGTG TCCTCAACCT GCTGCAAGGT
GGACGCGAAA CCGGTATCGC CCTGGCGGCG AATCCGGGTA TCGATGGCCT GTTCTTCACC
GGGTCGAGCC GCACTGGCAA CGCGCTGCAT CAGCAGTTCG CCGGGCGACC GGACAAGATT
CTCGCCCTGG AAATGGGCGG TAACAATCCG TTGGTGGTCG ATCAGGTCCA GGACATCGAC
GCGGCGGTTT ACACCATCAT TCAATCGGCG TTTATCTCCG CAGGCCAGCG CTGCACCTGT
GCGCGTCGTC TGCTGGTGCC CGAGGGCGAC TGGGGAGATG CGTTGCTGGC GCGGCTGGTT
GCCGTCAGCG CGACCCTCGA CGTGGGGGCG TTTGATCAGC AACCTGCGCC GTTCATGGGC
TCTGTCATTT CGCTTGAGGC CGCGCGGGCT TTGCTCGACG CGCAGCGTCA TCTGCTCGCC
AATGGCGCGG TGACCTTGCT GGAAATGCGT CAGCCGCAAC CCGGTGCGGC GCTGCTGACG
CCCGGTATTG TCGATGTCAG CGCAGTCGCA AACAGGCCCG ATGTAGAGCT GTTCGGCCCG
CTGTTGCAGG TCGTCCGCTA CGCCGGTTTT GATGCGGCGA TCGCCGAGGC CAACGCCACT
CAATACGGTC TGGCGGCGGG CCTGCTCTCG GACTCCGAAG CGCGTTATCA GCAGTTCTGG
CTGCAAAGCC GCGCCGGCAT CGTCAACTGG AACAAGCAAT TGACCGGGGC CGCCAGCAGC
GCGCCGTTCG GTGGCGTCGG GGCGTCGGGC AATCATCGCG CCAGCGCCTA TTACGCGGCC
GATTACTGCG CCTATCCGGT GGCGTCGCTG GAGACCGGCA GCCTGACTCT GCCCGCGACG
TTGACCCCGG GTGTGCGGCT GAGCTGA
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| Protein sequence | MSTLYIAGAW QAGQGELFHS LNPVTLHVLW SGQGATAEQV DHAVQAARQA FPAWALLSLD
QRIAVLDAFA VSLKAHADEL ANCIGEETGK PLWESATEVT SMVNKIAISV QSYRERTGEK
SAPLGDATAV LRHKPHGVVA VFGPYNFPGH LPNGHIVPAL LAGNTVLFKP SELTPKVAEL
TVKCWIEAGL PAGVLNLLQG GRETGIALAA NPGIDGLFFT GSSRTGNALH QQFAGRPDKI
LALEMGGNNP LVVDQVQDID AAVYTIIQSA FISAGQRCTC ARRLLVPEGD WGDALLARLV
AVSATLDVGA FDQQPAPFMG SVISLEAARA LLDAQRHLLA NGAVTLLEMR QPQPGAALLT
PGIVDVSAVA NRPDVELFGP LLQVVRYAGF DAAIAEANAT QYGLAAGLLS DSEARYQQFW
LQSRAGIVNW NKQLTGAASS APFGGVGASG NHRASAYYAA DYCAYPVASL ETGSLTLPAT
LTPGVRLS
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