| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1832 |
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| Symbol | argD-1 |
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| ID | 1183473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2000395 |
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| End bp | 2001612 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393207 |
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| Product | acetylornithine delta-aminotransferase |
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| Protein accession | NP_791656 |
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| Protein GI | 28869037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTTG AGCATGCTGC GGTGCAACGC GCCGATTTCG ACCAGGTAAT GGTCCCCAAT
TACGCCCCTG CCGGGTTCAT CCCTGTGCGT GGTGCGGGCT CCCGCGTCTG GGATCAGGCG
GGGCGCGAAC TGGTGGACTT CTCGGGCGGG ATCGCCGTCA ACGTATTGGG CCACTGCCAC
CCGGCGCTGG TCGGTGCCTT GACCGAGCAG GCCAATAACC TCTGGCATGT GTCCAACGTG
TTCACCAACG AGCCGACCCT GCGTCTAGCG AAAAAACTGG TGGACTCGAC CTTCGCCGAG
CGCGTGTTCT TCTGTAACTC GGGCGCCGAA GCCAACGAAG CGGCCTTCAA GCTGGCGCGC
CGTGTGGCGC ACGACCTGTA CGGCCCCGAG AAGTACGAAA TCATCGCGGC GGTAAACAGC
TTCCACGGCC GTACCCTGTT CACCGTGAGC GTCGGTGGCC AGCCGAAATA CTCCGATGGT
TTCGGGCCGA AAATCACCGG CATCAGCCAC GTGCCTTACA ACGACCTTGA AGCCTTGAAA
GCGGCTGTGA CCGACAAGAC CTGCGCCGTG GTGCTGGAGC CTATTCAGGG CGAAGGCGGT
GTTTTGCCGG GCGAGCTCGA CTACCTGCAA GGCGCGCGCA AACTGTGTGA CGAGCACAAC
GCGCTGCTGG TATTCGACGA AGTGCAGAGC GGCATGGGCC GTAGTGGCCA TCTGTTTGCG
TACATGCATT ACGGCGTGAC CCCGGACATC CTTTCCAGCG CCAAAAGCAT TGGCGGCGGT
TTCCCGCTGG CGGCCATGCT GACCACTGAA AAGCTCGCCA AGCACTTCGC AGTCGGTGTG
CACGGCACCA CGTACGGCGG CAACCCGCTG GCCTGCGCGG TGGGTGAGGC AGTGATCGAC
GTCATCAATA CGCCTGAAGT GCTGGCTGGC GTGCAGCGTA AGCATCAACA ATTCAAGACT
CGCCTGGAAA GCATCGGCCA GCAATATGGC GTGTTCACCG AAGTGCGCGG CCTGGGCCTG
TTGATCGGTT GCGTGCTGTC CGATGCCTGG AAAGGCAAGG CCAAGGACAT CTTCAACGCT
GCCGAAGCCC AGGACCTGAT GATTCTGCAG GCCGGTCCCG ACGTGATTCG TTTCGCGCCA
AGCCTGGTGA TCGAAGACGC CGACATCGAA GAAGGCCTGA ACCGCTTCGA GCGCGCCATC
GCCAAGCTTA CGTCCTGA
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| Protein sequence | MSVEHAAVQR ADFDQVMVPN YAPAGFIPVR GAGSRVWDQA GRELVDFSGG IAVNVLGHCH
PALVGALTEQ ANNLWHVSNV FTNEPTLRLA KKLVDSTFAE RVFFCNSGAE ANEAAFKLAR
RVAHDLYGPE KYEIIAAVNS FHGRTLFTVS VGGQPKYSDG FGPKITGISH VPYNDLEALK
AAVTDKTCAV VLEPIQGEGG VLPGELDYLQ GARKLCDEHN ALLVFDEVQS GMGRSGHLFA
YMHYGVTPDI LSSAKSIGGG FPLAAMLTTE KLAKHFAVGV HGTTYGGNPL ACAVGEAVID
VINTPEVLAG VQRKHQQFKT RLESIGQQYG VFTEVRGLGL LIGCVLSDAW KGKAKDIFNA
AEAQDLMILQ AGPDVIRFAP SLVIEDADIE EGLNRFERAI AKLTS
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