| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1812 |
|---|
| Symbol | |
|---|
| ID | 1183453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1980869 |
|---|
| End bp | 1981687 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393188 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791637 |
|---|
| Protein GI | 28869018 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCG TCGAGGCCGC AGACAGCCAG GCCGATGCCC AGCAGGAACT GCCGTTCGCG
CTGGTCTACG GGCGTGCGGT CACGCAGATG CCGCTGGATC TGTACATTCC GCCGGATGCG
CTCGAGGTTT TTCTCGAAGC GTTTGAGGGA CCGCTCGACC TGCTGCTGTA CCTGATTCGC
AAACAGAACA TCGACATCCT CGACATCCCG GTGGCCGAAA TCACCAAGCA GTACATGGGC
TACGTCGAGT TGATGAAAAC CGTGCGCCTG GAGCTAGCGG CTGAATACCT GGTGATGGCC
GCGATGCTGG CCGAGATCAA GTCGCGCATG CTTCTGCCGC GCTCGGCGGA AATCGAAGAG
GAGGAGGGCG ACCCACGTGC CGAACTGATT CGCCGCCTGC AGGAATACGA GCGTTTCAAG
GCCGCCGCCG AAGGGATCGA CGGCCTGAAA CGGGTCGGCC GCGACGTCAT CGTGCCGAAA
CTCGACGCCC CTGAAGCTCG TGCGCGCAAG CTGTTGCCGG ACGTCAGCCT TGAAGAGGTG
CTGATGTCCA TGGCCGAAGT GCTGCACCGC GGCGACATGT TCGAAAGCCA TCAGGTCAGC
CGCGAGGCGC TGTCGACGCG CGAGCGCATG AGCGACGTCC TGGAACGTCT CAAGGGCGGC
GGTTTCGTGC CGTTTGCCGA GCTGTTTACC GCAGAAGAAG GGCGTCTGGG TGTGGTCGTG
ACATTTATGG CTGTGCTTGA GCTGGTCAAG GAATCCCTTG TCGAGCTGGT CCAAAACGAG
CCCTTTGCGG CGATCCATGT CCGGGCGCGA GCCGAGTAG
|
|---|
| Protein sequence | MTVVEAADSQ ADAQQELPFA LVYGRAVTQM PLDLYIPPDA LEVFLEAFEG PLDLLLYLIR
KQNIDILDIP VAEITKQYMG YVELMKTVRL ELAAEYLVMA AMLAEIKSRM LLPRSAEIEE
EEGDPRAELI RRLQEYERFK AAAEGIDGLK RVGRDVIVPK LDAPEARARK LLPDVSLEEV
LMSMAEVLHR GDMFESHQVS REALSTRERM SDVLERLKGG GFVPFAELFT AEEGRLGVVV
TFMAVLELVK ESLVELVQNE PFAAIHVRAR AE
|
|---|
| |