| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1811 |
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| Symbol | |
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| ID | 1183452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1980240 |
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| End bp | 1980869 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393187 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | NP_791636 |
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| Protein GI | 28869017 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTCAAT TTTTCCAGGT CCATCCGGAA AACCCGCAGC CGCGCCTGAT CAAACAGGCC
GCGGAAATCA TAAAAGCCGG CGGGCTGGTG GTCTACCCGA CAGATTCCTC CTACGCGCTG
GGTTGCCAGA TCGGCGACAA GAGCGCCATC GAGCGTATCC GCCGCCTGCG CCAGCTGGAC
GACAAACACA ACTTCACCCT GATGTGCTGC GACCTGTCGC AACTGGGGCT GTTTGCCAAG
GTCGACACCG GCGCGTTCCG CGCGCTCAAG GCGCACACGC CAGGGCCTTA CACCTTTATT
CTCAACGCCA CCCGAGAAGT GCCGCGCCTG ATTTTGCACC CCAAGCGCCG CACCATCGGC
CTGCGTGTGC CGAGCCACCC CATCGCCCAG GCGTTGCTGG AGCAACTGGG CGAGCCGCTG
ATGAGCGTCA GCCTGATCAT GCCGGGTGAC ACCGTGCCGC TCAGCGATCC CTACGAAATG
CGCCAGATTC TCGAGCATCA CGTGGACCTG ATCATCGATG GCGGGATCGG CGGTATTTCG
GCGTCCACCG TGATCAACCT GTCCGAGGGC GAGCCGCAGA TCGTTCGTGT CGGTTGTGGT
GACCCAACCC CGTTCGGTGA CCGCGCTTAA
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| Protein sequence | MSQFFQVHPE NPQPRLIKQA AEIIKAGGLV VYPTDSSYAL GCQIGDKSAI ERIRRLRQLD
DKHNFTLMCC DLSQLGLFAK VDTGAFRALK AHTPGPYTFI LNATREVPRL ILHPKRRTIG
LRVPSHPIAQ ALLEQLGEPL MSVSLIMPGD TVPLSDPYEM RQILEHHVDL IIDGGIGGIS
ASTVINLSEG EPQIVRVGCG DPTPFGDRA
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