| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1799 |
|---|
| Symbol | |
|---|
| ID | 1183440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1971103 |
|---|
| End bp | 1971924 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637393175 |
|---|
| Product | Ser/Thr protein phosphatase family protein |
|---|
| Protein accession | NP_791624 |
|---|
| Protein GI | 28869005 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.173881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTG CTCAGCTCGC CACACCCAGC CGCAAACAAC GTGTGCGGAC CTTGTGGATT
TCTGACGTTC ACCTGGGCAC GCGCGACTGC CAGGCCGAGC ACTTGTCGGC GTTTCTCAAG
CGTTATCAGG CGGACAAGGT GTACCTGGTC GGCGACATCA TCGACGGCTG GAAACTGCGC
GGGGGCATGT ACTGGCCGCA AGCGCACACC AACGTGATTC GGCGCTTGCT GACCATGAGC
AAGCGCGGCA CAGAAGTGAT TTACGTCACC GGCAACCATG ACGAGTTCCT GCGTCGTTAC
TCGAAGCTTA TTCTGGGCAA CATCCAGTTG GTGGATGAAG CCGAGCACGT AACTGCCGAT
GGCCGACGCT TTCTGGTCAT CCACGGCGAC CAGTTCGATG TGATCACCCG CTATCACCGC
TGGCTGGCCT TTCTAGGCGA CTCGGCCTAC GAATTCACCC TGACCCTCAA CCGCTGGTTG
AACCACTGGC GGGCCAAATA CGGCTATGGC TACTGGTCGC TGTCGGCGTA CTTGAAACAC
AAGGTCAAAA GTGCAGTGAA CTTCATCAGC GATTTCGAAG AGGCCATCGC CCACGAATGC
GTCAAGCGCG GGCTGGACGG CGTGGTCTGC GGGCACATTC ACCATGCGGA AATCCGCCAG
GTGGGCGGTG TGGAATACCT CAATTGCGGC GACTGGGTCG AATCCTGTAC CGCACTGATC
GAGCATCTGG ACGGCAACAT CGAACTGTTC CGCCTGGCGG ACGCGCATGT GCAAGCGGCT
CAGCAGGGGA TTCGCGAGCC GGTCAGCGAA ACGGTTACGT GA
|
|---|
| Protein sequence | MTSAQLATPS RKQRVRTLWI SDVHLGTRDC QAEHLSAFLK RYQADKVYLV GDIIDGWKLR
GGMYWPQAHT NVIRRLLTMS KRGTEVIYVT GNHDEFLRRY SKLILGNIQL VDEAEHVTAD
GRRFLVIHGD QFDVITRYHR WLAFLGDSAY EFTLTLNRWL NHWRAKYGYG YWSLSAYLKH
KVKSAVNFIS DFEEAIAHEC VKRGLDGVVC GHIHHAEIRQ VGGVEYLNCG DWVESCTALI
EHLDGNIELF RLADAHVQAA QQGIREPVSE TVT
|
|---|
| |