Gene PSPTO_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1798 
Symbol 
ID1183439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1970708 
End bp1971010 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content60% 
IMG OID637393174 
Producthypothetical protein 
Protein accessionNP_791623 
Protein GI28869004 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3526] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02174] selT/selW/selH selenoprotein domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.354714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG AAAAACCTGA AGTCATCATC ACCTATTGCA TCCAATGTCA GTGGTTGCTG 
CGCGCGGCCT GGCTGGCCCA GGAACTGTTG AGTACGTTCA GCGATGATCT GGGCAAGGTT
TCCTTGCAGC CGGGCACCGG CGGTGCGTTC CGCATTACCT GCGATGGCGT GCAACTGTGG
GAGCGCAAGG CCGACGGCGG CTTTCCCGAG GCCAAGGTGC TCAAGCAGCG GCTGCGCGAC
CAGATAGATC CGGCCCGTGA TCTGGGTCAT AACGACCGCC AAACGCCCAG CAATCCTCAG
TAA
 
Protein sequence
MSAEKPEVII TYCIQCQWLL RAAWLAQELL STFSDDLGKV SLQPGTGGAF RITCDGVQLW 
ERKADGGFPE AKVLKQRLRD QIDPARDLGH NDRQTPSNPQ