Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1798 |
Symbol | |
ID | 1183439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1970708 |
End bp | 1971010 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393174 |
Product | hypothetical protein |
Protein accession | NP_791623 |
Protein GI | 28869004 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3526] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02174] selT/selW/selH selenoprotein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.354714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCG AAAAACCTGA AGTCATCATC ACCTATTGCA TCCAATGTCA GTGGTTGCTG CGCGCGGCCT GGCTGGCCCA GGAACTGTTG AGTACGTTCA GCGATGATCT GGGCAAGGTT TCCTTGCAGC CGGGCACCGG CGGTGCGTTC CGCATTACCT GCGATGGCGT GCAACTGTGG GAGCGCAAGG CCGACGGCGG CTTTCCCGAG GCCAAGGTGC TCAAGCAGCG GCTGCGCGAC CAGATAGATC CGGCCCGTGA TCTGGGTCAT AACGACCGCC AAACGCCCAG CAATCCTCAG TAA
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Protein sequence | MSAEKPEVII TYCIQCQWLL RAAWLAQELL STFSDDLGKV SLQPGTGGAF RITCDGVQLW ERKADGGFPE AKVLKQRLRD QIDPARDLGH NDRQTPSNPQ
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