| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1794 |
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| Symbol | |
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| ID | 1183435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1966670 |
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| End bp | 1967575 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393170 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791619 |
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| Protein GI | 28869000 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG ATGATATCGA TGCGTTCGTT GCAGTCATCC GCTGTCAGTC GATCAGCCAC
GCCGCTGAAT CGCTGGATCT GACCCAGCCG GCCATCACGC GCCGGGTGCA GAACTTCGAG
CAGGCGCTGG GGGTCGAGCT GTTCGACCGC AATACCAAGC CGCTCAAGCC GACGCCGATG
GGTATTCAGG TCTACCAGAA GTGCCTTGCC ATCCTGCGCG AGATGGATTC GCTGCGCGAG
CTGGTGGCCA GCGACACACC GCCCAGCGGC CTGCTGCGGC TGGGCGTGCC GCAAACCATC
GGCGACGTGG TGCTGCTCGA TGCGCTCAAG CAATTGCGCG GCGAGTTTCC GGACTTGCGC
GCGCAGGTCA GCACCGGCTG GGGCAGCCAC CTGATCGGCA AGATTGAAAA CGGCGAGCTG
GATGCAGCGG CAGCGCTGTT CCCGGCAGGC AAGATATTCC CGGACAACAT CGTCGGTCAG
TCCATCGGCA AGATGGAACT GGTGGTGGTC TGCGCCAAAG GCTCGGTGCC GAAAAAGCCC
GGCAAGCTGG CAGATTGTTA CGAGCAGGGC TGGGTGCTCA ACCCCGATGG CTGCGGTTTT
CGTGCAGGTT TACAGCGTAC GTTGACCGAT CAAGGCCTGA GCATGAAGGT CAATCTGGAA
ACCTTCGGCA CTGAGCTGCA ACTCGGGCTG GTGGCCGATG GGATGGGGCT GGGCCTGGTA
CCAAGACCGT TGCTGGAACG CAGCGCCCAC CGCGAACAAT TGGTGGTGTT GCCGCTCAAG
GACTTCAAAC CGGTAATGGA CCTGTGGCTG TTCTACCCGC GCTTTCTCGG CAACCTGCAA
GCGCCGGTCG AGGCTTTTGG CGCGCTGGTG GCGCGTTCCC TCAAACCGCT TTCAGCCGCA
GCCTGA
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| Protein sequence | MKIDDIDAFV AVIRCQSISH AAESLDLTQP AITRRVQNFE QALGVELFDR NTKPLKPTPM
GIQVYQKCLA ILREMDSLRE LVASDTPPSG LLRLGVPQTI GDVVLLDALK QLRGEFPDLR
AQVSTGWGSH LIGKIENGEL DAAAALFPAG KIFPDNIVGQ SIGKMELVVV CAKGSVPKKP
GKLADCYEQG WVLNPDGCGF RAGLQRTLTD QGLSMKVNLE TFGTELQLGL VADGMGLGLV
PRPLLERSAH REQLVVLPLK DFKPVMDLWL FYPRFLGNLQ APVEAFGALV ARSLKPLSAA
A
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