Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1793 |
Symbol | |
ID | 1183434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1965836 |
End bp | 1966450 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393169 |
Product | hypothetical protein |
Protein accession | NP_791618 |
Protein GI | 28868999 |
COG category | [R] General function prediction only |
COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGA ACCGACACCC GGAACGACTC GGGGCCTTTA TCGATGCGCT GGCCGAACTG ATAGGCAGCG AGCCGCACGA AGGCGATCTG TTGCGTCGCG GCGGCAAGCT GCTGGCGCAA CTGGTCAGCC ATGATGACTG GCTGGCGGAC GAGTTCGCCC AGCCCGACCC CGCCCGCTAT CAGCAATTTC TGTTGCATGC CGACCCGCAG CAACGCTTTT CGGTGGTCAG TTTTGTCTGG GGGCCGGGGC AACGAACGCC TATTCACGAT CATCGGGTCT GGGGCCTGAT CGGCATGTTG CGTGGCGCCG AGCATTCACA GGGCTATGTG CGCAATACCC AAGGGCGCTT CGAGACCAGC GGCCCGTCGA TTCGTCTGCA ACCCGGCCAG GTTGAGGCGC TGTCGCCGCA CAGCAACGAT GTCCACCAGG TCAGCAATGC CTTTGATGAT CAGGTGTCGA TCAGCATTCA CGTGTACGGC GCCGACATCG GCACCGTGAA ACGCGCCGTC TATGACCTGG ACGGCAGCGA AAAACTGTTC ATTTCCGGCT ATTCCAACGC CGCTGCTATC ACACGTGCCC ACCAGGACCT GCCAACAGGG AGTTACACCC GATGA
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Protein sequence | MNQNRHPERL GAFIDALAEL IGSEPHEGDL LRRGGKLLAQ LVSHDDWLAD EFAQPDPARY QQFLLHADPQ QRFSVVSFVW GPGQRTPIHD HRVWGLIGML RGAEHSQGYV RNTQGRFETS GPSIRLQPGQ VEALSPHSND VHQVSNAFDD QVSISIHVYG ADIGTVKRAV YDLDGSEKLF ISGYSNAAAI TRAHQDLPTG SYTR
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