Gene PSPTO_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1793 
Symbol 
ID1183434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1965836 
End bp1966450 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID637393169 
Producthypothetical protein 
Protein accessionNP_791618 
Protein GI28868999 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGA ACCGACACCC GGAACGACTC GGGGCCTTTA TCGATGCGCT GGCCGAACTG 
ATAGGCAGCG AGCCGCACGA AGGCGATCTG TTGCGTCGCG GCGGCAAGCT GCTGGCGCAA
CTGGTCAGCC ATGATGACTG GCTGGCGGAC GAGTTCGCCC AGCCCGACCC CGCCCGCTAT
CAGCAATTTC TGTTGCATGC CGACCCGCAG CAACGCTTTT CGGTGGTCAG TTTTGTCTGG
GGGCCGGGGC AACGAACGCC TATTCACGAT CATCGGGTCT GGGGCCTGAT CGGCATGTTG
CGTGGCGCCG AGCATTCACA GGGCTATGTG CGCAATACCC AAGGGCGCTT CGAGACCAGC
GGCCCGTCGA TTCGTCTGCA ACCCGGCCAG GTTGAGGCGC TGTCGCCGCA CAGCAACGAT
GTCCACCAGG TCAGCAATGC CTTTGATGAT CAGGTGTCGA TCAGCATTCA CGTGTACGGC
GCCGACATCG GCACCGTGAA ACGCGCCGTC TATGACCTGG ACGGCAGCGA AAAACTGTTC
ATTTCCGGCT ATTCCAACGC CGCTGCTATC ACACGTGCCC ACCAGGACCT GCCAACAGGG
AGTTACACCC GATGA
 
Protein sequence
MNQNRHPERL GAFIDALAEL IGSEPHEGDL LRRGGKLLAQ LVSHDDWLAD EFAQPDPARY 
QQFLLHADPQ QRFSVVSFVW GPGQRTPIHD HRVWGLIGML RGAEHSQGYV RNTQGRFETS
GPSIRLQPGQ VEALSPHSND VHQVSNAFDD QVSISIHVYG ADIGTVKRAV YDLDGSEKLF
ISGYSNAAAI TRAHQDLPTG SYTR