| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1788 |
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| Symbol | |
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| ID | 1183429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1958574 |
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| End bp | 1959545 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393164 |
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| Product | ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family |
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| Protein accession | NP_791613 |
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| Protein GI | 28868994 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACGA TCATTATCCG TTGCGGTAAA CGCCTGCTGA CAGGGCTGGC CTTGGTGCTG
TTTGCTGTGG TGAACACGCA GGCTGCCAAT CTGATCGTCG GTGATCAGAG TTACAGCGCG
CAGACCGTGA TGCAAGCCGC CGGTGTGCTC AAGGATTTGC CTTACGAGCT TGAGTGGAAG
CAGTTCACCG CAGGCTCCCC GGTCGCTGAG GCGTTGAACG TCGGTAGCCT GGACATCGGA
TTGCTGGGCG ATTCGCCTGC GCTGTTCATG GGTGCGCTGG GGGCGCCGAT CAAGGTGATC
GGCGTGTCGC GGCAGAACCT CGACGGCGTT GCGATTGTGG TGCGCAAGGA TTCGCCGATC
CACACGGTTG CCGATCTGGC GGGCAAGAAA GTCGCTATCT GGAAAGGCTC GTTCAGCCAG
CAATTGATGC TCACCGCACT GGACAAGGCC GGGGTCGCCC GCGGCGCCGT TGATTATCGT
TACCTCAGTG CACTGGATTC CTCCCACGCA CTGGACGGCG GCTCGGTGGA CGCGATTGCA
ACCTGGGAAC CCTACGTCAC TCAACAAGAG CGCCAGGGCG CACGCATCAT CGCCACCGCC
GAAGGGCTGA TCCCCGCGCA GAGCTTCATT GTTGCCAACG ATCAGGCCAT CAAGGACAAA
CGTGCGCAGA TCAGCGACTT CCTGCAACGC CTGCAGGCTG CCCGCGCCTG GTCGGTCAGT
GACCCGCAGC ACAATGAACG CTACGCCAAT GCCTGGGCCG CGCTGACCAA AGCCGATGCG
CAGGTCGCAC GCCGCTGGTT TTCCCGCGCG CTGGTCGTGG TGGTGCCGAT TACCCCGCAA
GTGGTGGCCG GTGCGCAGCA GACCATCGAC TTTTTCAACA ACGCCGGGCT GACCAAGCGC
TATCCTGCTG CCAGCGTGTT CGACGAGTCG TTCAATGCGG CGCTGGGCAG CCAGACGCAG
GTTGCCCGCT GA
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| Protein sequence | MSTIIIRCGK RLLTGLALVL FAVVNTQAAN LIVGDQSYSA QTVMQAAGVL KDLPYELEWK
QFTAGSPVAE ALNVGSLDIG LLGDSPALFM GALGAPIKVI GVSRQNLDGV AIVVRKDSPI
HTVADLAGKK VAIWKGSFSQ QLMLTALDKA GVARGAVDYR YLSALDSSHA LDGGSVDAIA
TWEPYVTQQE RQGARIIATA EGLIPAQSFI VANDQAIKDK RAQISDFLQR LQAARAWSVS
DPQHNERYAN AWAALTKADA QVARRWFSRA LVVVVPITPQ VVAGAQQTID FFNNAGLTKR
YPAASVFDES FNAALGSQTQ VAR
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