| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1779 |
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| Symbol | |
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| ID | 1183416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1948745 |
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| End bp | 1949956 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393151 |
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| Product | aminotransferase, classes I and II |
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| Protein accession | NP_791604 |
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| Protein GI | 28868985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCA ACAAATCGAA CAAGCTCGCA AACGTCTGCT ACGACATTCG CGGGCCAGTG
CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCATCGCA TCCTCAAGCT GAATATCGGC
AACCCGGCAC CGTTTGGTTT CGAGGCGCCG GACGAAATCC TGCAGGACGT GATCCGCAAC
CTGCCGACCG CTCAGGGCTA CAGCGACTCC AAGGGCCTGT TCAGCGCCCG CAAGGCGGTC
ATGCAGTACT ACCAGCAGAA GCAGGTCGAA GGTGTCGGCA TCGAAGACAT CTACCTGGGC
AACGGCGTTT CCGAGCTGAT CGTGATGTCG ATGCAGGCGC TGCTAAATAA CGGCGACGAA
GTGCTGGTTC CGGCACCCGA TTACCCATTG TGGACCGCCG CAGTTGCGCT GTCCGGTGGC
AGCCCGGTGC ATTATCTGTG CGACGAGCAG GCCAACTGGT GGCCTGACCT TGAAGACATC
AAGGCCAAGA TCACGCCGAA CACCAAGGCC ATGGTCATCA TCAACCCGAA CAACCCCACC
GGTGCGGTGT ATTCCCGCGA AGTGCTGCTG GGCATGCTGG AGCTGGCCCG TCAGCACAAC
CTGGTGGTGT TCTCCGACGA AATATACGAC AAAATCCTGT ATGACGACGC CGTGCATATC
TGCACCGCCT CGCTGGCGCC GGACCTGCTG TGCCTGACCT TCAACGGCTT GTCGAAATCG
TACCGCGTTG CGGGCTTCCG CTCGGGCTGG ATCGCCATTT CCGGGCCGAA ACACAACGCG
CAGAGCTACA TCGAAGGCAT CGACATTCTG GCCAACATGC GCCTGTGCGC CAACGTGCCT
AGCCAGCACG CCATCCAGAC CGCGCTGGGC GGCTACCAGA GCATCAATGA CCTGATCCTG
CCACCAGGTC GCCTGCTGGA GCAGCGCAAC CGCACCTGGG AGTTGCTCAA CGACATTCCC
GGCGTGAGCT GCGTCAAGCC GATGGGCGCG CTGTATGCGT TCCCGCGCAT CGACCCGAAG
GTCTGCCCGA TCTTCAACGA CGAGAAGTTT GTGCTCGACC TGCTGCTCTC GGAAAAACTG
CTGGTGGTTC AGGGCACTGC GTTCAACTGG CCTTATCCTG ACCACTTCCG CGTGGTGACC
CTGCCTCGGG TCGACGAGCT GGAGCAGGCC ATTGGCCGCA TCGGCAACTT CCTCAAGGGT
TATCGTCAGT AA
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| Protein sequence | MQFNKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN
LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVGIEDIYLG NGVSELIVMS MQALLNNGDE
VLVPAPDYPL WTAAVALSGG SPVHYLCDEQ ANWWPDLEDI KAKITPNTKA MVIINPNNPT
GAVYSREVLL GMLELARQHN LVVFSDEIYD KILYDDAVHI CTASLAPDLL CLTFNGLSKS
YRVAGFRSGW IAISGPKHNA QSYIEGIDIL ANMRLCANVP SQHAIQTALG GYQSINDLIL
PPGRLLEQRN RTWELLNDIP GVSCVKPMGA LYAFPRIDPK VCPIFNDEKF VLDLLLSEKL
LVVQGTAFNW PYPDHFRVVT LPRVDELEQA IGRIGNFLKG YRQ
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