Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1771 |
Symbol | |
ID | 1183408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1940924 |
End bp | 1941235 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637393143 |
Product | hypothetical protein |
Protein accession | NP_791596 |
Protein GI | 28868977 |
COG category | [S] Function unknown |
COG ID | [COG5457] Uncharacterized conserved small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTGCA TAAGAAACAT TCGTTGGATT GATCCTACGC CAGGCGCGAG ACTTCAGTCA TCCCACATGG AGGGCAAGAT GATGAAAGGT CAAAAAGCGG GTGTAGTGGA CTCAAGGCCT GTCGAGCATG TGCAGGCAGG CAGGGCTTTG ATATCGCTGA AGCGTCATGT GCAGCGTTGG CTGGAACTGC ATCGTCAGTG GCGTCTTCTG GCGCAGATGA GCGATGGCGC GCTCAAGGAT CTGGGCTTGA GCCGGGCGGA TATTCAACAG GAAGTCGAAC GTCCGTTCTG GGACGACCCG CTCAAGCGTT GA
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Protein sequence | MDCIRNIRWI DPTPGARLQS SHMEGKMMKG QKAGVVDSRP VEHVQAGRAL ISLKRHVQRW LELHRQWRLL AQMSDGALKD LGLSRADIQQ EVERPFWDDP LKR
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