| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1770 |
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| Symbol | |
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| ID | 1183407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1940053 |
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| End bp | 1940907 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393142 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791595 |
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| Protein GI | 28868976 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCAATT ATCCGGGCAT TGATACCGAA CTGCTTCGTA CCTTTGTGGC CATTGCCGAC
CACGGCGGTT TCACTCGCGC AGGTGAAGTG GTCAACCGCA CTCAATCGGC GGTCAGCATG
CAGATGAAGC GTCTGGAAGA GGATGTCGTT CAGCGTCAAC TGTTCCAGCG TGAAGGCCGG
ACCCTGAACC TCACAGCAGA GGGCCAGGTA CTGCTCGGCT ACGCACGGCG GATTCTCAAG
TTGCACAGCG AAGTGTTCAA CACCTTGCGC GAGCCGCACA TGGTCGGCGT GGTGAAAATC
GGCTCGCCCG ACGATTACGT GATGCGCTTT TTGCCCGGCA TCCTTTCGCA GTTCGCGCAG
GCTTATCCGC TGGTTCAGGT GGAAGTGCAC TGCGAACCGT CCGATTTGCT GCTGCAACGC
CAGGACCTTG ATCTGACCAT TGTGACGCGC AAGCCCGGCA CCGAGATCGG TACGCTGTTG
CGTCACGAGC GCCTGGTCTG GATGGAGGCC ATCGGCTTCG CGCCTCATGA ACAAAAGCCC
ATGCCGCTGG CGATGTTCAA TACCCATTGC TTTTGTCGCG ACTGGGCCTG CAATGCGCTG
GACAGCGTGG AGCGTGAGTA CCGCATCGCC TACACCAGTT CCAGCATGGC GGCGATCACT
GCCGTGGTCA GCGCAGGCCT TGCGGTCACC GCGCAGTTTC AAAGCCTGGC CACACCGGAG
TTGCGCATCC TCGGCGATGC CGAACACTTG CCACATCTGC CAACGGCCAG CATCGTGCTG
CTGCGCAACC CGAAGACCCC CTCACCCATC ACCGAATGCA TGGCCGACTA CATCATCGAC
GGTTTCAAAC CTTGA
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| Protein sequence | MANYPGIDTE LLRTFVAIAD HGGFTRAGEV VNRTQSAVSM QMKRLEEDVV QRQLFQREGR
TLNLTAEGQV LLGYARRILK LHSEVFNTLR EPHMVGVVKI GSPDDYVMRF LPGILSQFAQ
AYPLVQVEVH CEPSDLLLQR QDLDLTIVTR KPGTEIGTLL RHERLVWMEA IGFAPHEQKP
MPLAMFNTHC FCRDWACNAL DSVEREYRIA YTSSSMAAIT AVVSAGLAVT AQFQSLATPE
LRILGDAEHL PHLPTASIVL LRNPKTPSPI TECMADYIID GFKP
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