| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1768 |
|---|
| Symbol | |
|---|
| ID | 1183405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1938658 |
|---|
| End bp | 1939131 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637393140 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | NP_791593 |
|---|
| Protein GI | 28868974 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG ATGAAAGCCC CACCCACGTC GCATCTGCCG ACTGTGATTC GCTGCTGCTG
GATAACCAAT TGTGTTTCGC CCTGTATTCC ACTTCGTTGA TGATGACCAA GGTTTACAAA
CCCTTGCTAC AAGCGCTCGG GCTGACCTAT CCGCAGTATC TGGCCATGAT GGTGCTGTGG
GAAAAGGACG GTTTGACCGT CAGCGATGTC AGCACGCGCC TGCTCACTGA TCCGGGCTCG
CTGACGCCTT TACTCAAGCG CCTTGAAGGC GAAGGCTTTA TCAGCCGCAC GCGCAGCAAG
GAAGATGAAC GGGTGGTGCT GTTGCATCTC ACTGAGCAAG GTCGTGCCTT GCAGCAGAAG
GCCCTGAGCG TACCTGGCTG CATCCTGTCG GCAAGCGGCC TGAACATGGA AAAGCTTCTC
GACCTCCAGG CTCGGTTGCT GAGCATGCGC GACCATCTGC ACCAAAGCCT GTAA
|
|---|
| Protein sequence | MSADESPTHV ASADCDSLLL DNQLCFALYS TSLMMTKVYK PLLQALGLTY PQYLAMMVLW
EKDGLTVSDV STRLLTDPGS LTPLLKRLEG EGFISRTRSK EDERVVLLHL TEQGRALQQK
ALSVPGCILS ASGLNMEKLL DLQARLLSMR DHLHQSL
|
|---|
| |