Gene PSPTO_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1760 
Symbol 
ID1183397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1932296 
End bp1933573 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content57% 
IMG OID637393132 
Productthreonine/serine transporter 
Protein accessionNP_791585 
Protein GI28868966 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATC AGGCTAACGG CGTCGTAGAA CGCCTGGATG TAGCTCCCGA GAGCATCGCC 
TCTTGGAACC GTAATGACAC CACCTGGATG CTCGGATTGT TCGGTACCGC CATTGGCGCA
GGTACGCTGT TCTTGCCCAT CAACGCAGGC ATCGGCGGTT TCTGGCCACT GCTGGCTCTC
GCGCTGCTGG CATTCCCGAT GACGTTTTAT GCACACCGTG GCCTGACCCG CTTCGTACTG
TCCGGGCGTG AGGGTGCCGA CATCACGGAA GTGGTCGAAC AGCATTTCGG CAAAAGCGCC
GGGGCAATGA TCACCTTGCT GTACTTCTTC GCGATCTTCC CGATCCTGTT GATTTACAGC
GTGGCCCTCA CCAATACCGT GGGCAGCTTT CTTGAACACC AATTGCACAT AGCGCCGCCG
CCGCGTGCCG TGCTGGCGTT CTTGCTGATC ATGGGCCTGC TGGCGCTGGT TCGCTGTGGC
GAGCGGTTCA TCGTCAAGGC CATGAGCGTG ATGGTTTATC CGTTTATCGT CGCGCTGCTG
TTTCTGGCCA TGTTTCTGAT TCCACACTGG ACCGGCGGTA TCTTGAGCAC CGCAACCACC
TTGCCTGAGC CCTCGGCGTT TTTGTCGACC CTTTGGCTGG CGATTCCGGT GATGGTGTTT
TCTTTCAACC ATGCGCCGAT CATCTCGGCT TTTGCGGTCG ATCAGAAACG CCAGTACGGC
GAGAATGCCG AGGTGCGCAG TTCGCAGATT CTGGCACGCG CCCACGTTTT GATGGTGGTG
ATGGTGCTGT TCTTCGTGTT CAGCTGCGTG CTGACCCTTT CGCCCGCTGA ACTGGCTGAA
GCCAAGGCGC AGAACATCTC GATCCTGTCT TACCTGGCCA ACCACTTCAA CAACCCGACC
ATTGCATTCG TCGCGCCGCT GATTGCGTTT GTGGCGATTT CCAAATCGTT TCTCGGCCAC
TACATCGGCG CCAGCGAGGG CTTGAAAGGG CTGGTTCTGA AATCGGGACG TCGTCCGGCG
CCCAAGGTAC TGGACCGTAT GACCGCCGCG TTCATGCTGG TGGTGTGCTG GATAGTGGCA
ACGCTCGACC CAAGTATTCT GGGGATGATC GAGAACCTGG GCGGGCCAGT GATTTCGGTG
TTGCTGTTTC TGATGCCGAT GTATGCGATC TACAAGGTGC CTTCCATGCG CAAATATGCA
GGTGCATGGT CCAACTACTT TGTCATTGCC GCAGGTCTGG TGGCTATTTC GGCGCTGATC
TTCTCGCTGA CGCGCTGA
 
Protein sequence
MNDQANGVVE RLDVAPESIA SWNRNDTTWM LGLFGTAIGA GTLFLPINAG IGGFWPLLAL 
ALLAFPMTFY AHRGLTRFVL SGREGADITE VVEQHFGKSA GAMITLLYFF AIFPILLIYS
VALTNTVGSF LEHQLHIAPP PRAVLAFLLI MGLLALVRCG ERFIVKAMSV MVYPFIVALL
FLAMFLIPHW TGGILSTATT LPEPSAFLST LWLAIPVMVF SFNHAPIISA FAVDQKRQYG
ENAEVRSSQI LARAHVLMVV MVLFFVFSCV LTLSPAELAE AKAQNISILS YLANHFNNPT
IAFVAPLIAF VAISKSFLGH YIGASEGLKG LVLKSGRRPA PKVLDRMTAA FMLVVCWIVA
TLDPSILGMI ENLGGPVISV LLFLMPMYAI YKVPSMRKYA GAWSNYFVIA AGLVAISALI
FSLTR