Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1760 |
Symbol | |
ID | 1183397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1932296 |
End bp | 1933573 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393132 |
Product | threonine/serine transporter |
Protein accession | NP_791585 |
Protein GI | 28868966 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATC AGGCTAACGG CGTCGTAGAA CGCCTGGATG TAGCTCCCGA GAGCATCGCC TCTTGGAACC GTAATGACAC CACCTGGATG CTCGGATTGT TCGGTACCGC CATTGGCGCA GGTACGCTGT TCTTGCCCAT CAACGCAGGC ATCGGCGGTT TCTGGCCACT GCTGGCTCTC GCGCTGCTGG CATTCCCGAT GACGTTTTAT GCACACCGTG GCCTGACCCG CTTCGTACTG TCCGGGCGTG AGGGTGCCGA CATCACGGAA GTGGTCGAAC AGCATTTCGG CAAAAGCGCC GGGGCAATGA TCACCTTGCT GTACTTCTTC GCGATCTTCC CGATCCTGTT GATTTACAGC GTGGCCCTCA CCAATACCGT GGGCAGCTTT CTTGAACACC AATTGCACAT AGCGCCGCCG CCGCGTGCCG TGCTGGCGTT CTTGCTGATC ATGGGCCTGC TGGCGCTGGT TCGCTGTGGC GAGCGGTTCA TCGTCAAGGC CATGAGCGTG ATGGTTTATC CGTTTATCGT CGCGCTGCTG TTTCTGGCCA TGTTTCTGAT TCCACACTGG ACCGGCGGTA TCTTGAGCAC CGCAACCACC TTGCCTGAGC CCTCGGCGTT TTTGTCGACC CTTTGGCTGG CGATTCCGGT GATGGTGTTT TCTTTCAACC ATGCGCCGAT CATCTCGGCT TTTGCGGTCG ATCAGAAACG CCAGTACGGC GAGAATGCCG AGGTGCGCAG TTCGCAGATT CTGGCACGCG CCCACGTTTT GATGGTGGTG ATGGTGCTGT TCTTCGTGTT CAGCTGCGTG CTGACCCTTT CGCCCGCTGA ACTGGCTGAA GCCAAGGCGC AGAACATCTC GATCCTGTCT TACCTGGCCA ACCACTTCAA CAACCCGACC ATTGCATTCG TCGCGCCGCT GATTGCGTTT GTGGCGATTT CCAAATCGTT TCTCGGCCAC TACATCGGCG CCAGCGAGGG CTTGAAAGGG CTGGTTCTGA AATCGGGACG TCGTCCGGCG CCCAAGGTAC TGGACCGTAT GACCGCCGCG TTCATGCTGG TGGTGTGCTG GATAGTGGCA ACGCTCGACC CAAGTATTCT GGGGATGATC GAGAACCTGG GCGGGCCAGT GATTTCGGTG TTGCTGTTTC TGATGCCGAT GTATGCGATC TACAAGGTGC CTTCCATGCG CAAATATGCA GGTGCATGGT CCAACTACTT TGTCATTGCC GCAGGTCTGG TGGCTATTTC GGCGCTGATC TTCTCGCTGA CGCGCTGA
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Protein sequence | MNDQANGVVE RLDVAPESIA SWNRNDTTWM LGLFGTAIGA GTLFLPINAG IGGFWPLLAL ALLAFPMTFY AHRGLTRFVL SGREGADITE VVEQHFGKSA GAMITLLYFF AIFPILLIYS VALTNTVGSF LEHQLHIAPP PRAVLAFLLI MGLLALVRCG ERFIVKAMSV MVYPFIVALL FLAMFLIPHW TGGILSTATT LPEPSAFLST LWLAIPVMVF SFNHAPIISA FAVDQKRQYG ENAEVRSSQI LARAHVLMVV MVLFFVFSCV LTLSPAELAE AKAQNISILS YLANHFNNPT IAFVAPLIAF VAISKSFLGH YIGASEGLKG LVLKSGRRPA PKVLDRMTAA FMLVVCWIVA TLDPSILGMI ENLGGPVISV LLFLMPMYAI YKVPSMRKYA GAWSNYFVIA AGLVAISALI FSLTR
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