| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1754 |
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| Symbol | |
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| ID | 1183391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1925715 |
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| End bp | 1926695 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393126 |
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| Product | UDP-glucose 4-epimerase, putative |
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| Protein accession | NP_791579 |
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| Protein GI | 28868960 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0706021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGTG ATGTTGCATT GGTTGCGATA ACAGGTGCGA CAGGTTTCGT GGGCAGTGCC
GTGGTTCGCC GGTTGATCGA GCGTACCCGC TGTGCTGTCA GGGTTGCAGT GCGGGGTGCG
TACACTTGCG CTTCACCACG CATCAGCGCT GTGGCCATGC AATCGCTGGC GCCGGACAAC
CGGTGGGAAA GCTTTGTAGC TGGCGCGCAG GTGGTTATTC ATTGTGCTGC GCGGGTTCAT
GTCCTCAACG AAACCGCCAC CGAGCCTGAT CACGCGTATT TCAGCGCCAA CGTGACTGCG
ACCCTGAACC TCGCCGAACA GGCCGCTGCG GCGGGGGTGA AGCGCTTCAT CTTTATCAGC
TCCATCAAGG CCAGCGGCGA GTCTACGCCG CCGGGTGCCC CTTTCAGGGC TGATGATCCG
TGCAATCCGC TGGACCCCTA CGGTGTTTCC AAGCAAAAGG CTGAAGAGGG GCTGCGAGCG
CTGGCTGCCC GCTCCGGCAT GCAGGTGGTG ATCATTCGTC CCGTTCTGGT CTACGGCCCA
GGGGTCAAGG CCAACTTCAG GAGCATGATG CGCTGGCTCG ACAAGGGGCT GCCGTTGCCG
CTGGGGGCTA TCGATAATCG CCGCAGTCTG GTGGCAGTGG GCAATCTGGC GGACCTGGTG
GTGGTGTGCG TCGATCACCC TGCGGCGGCA GGTCAGACCT TCCTTGTCAG TGACGGTGAC
GACCTATCCA CCACCCGGCT TTTGCGTGAG ATGGGCAGGG CGCTTGGCAA ACCGGCCCGG
TTGTTGCCTG TGCCAGCTGT ACTGTTGAAA GGCGCGGCAG CATTGCTTGG CAAGAAAGCC
TTTTCACAAC GGCTATGCAG CTCTTTGCAG GTCGATATCA GTAAAACCTG TACGATGCTC
GATTGGCATC CACCTGTGAG TATTGAACAC GCCATGCAAG ACACCGCCCG GTATTATCTG
GAACACGACA AGCATGATTG A
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| Protein sequence | MNGDVALVAI TGATGFVGSA VVRRLIERTR CAVRVAVRGA YTCASPRISA VAMQSLAPDN
RWESFVAGAQ VVIHCAARVH VLNETATEPD HAYFSANVTA TLNLAEQAAA AGVKRFIFIS
SIKASGESTP PGAPFRADDP CNPLDPYGVS KQKAEEGLRA LAARSGMQVV IIRPVLVYGP
GVKANFRSMM RWLDKGLPLP LGAIDNRRSL VAVGNLADLV VVCVDHPAAA GQTFLVSDGD
DLSTTRLLRE MGRALGKPAR LLPVPAVLLK GAAALLGKKA FSQRLCSSLQ VDISKTCTML
DWHPPVSIEH AMQDTARYYL EHDKHD
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