| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1753 |
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| Symbol | |
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| ID | 1183390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1924100 |
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| End bp | 1925542 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393125 |
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| Product | hypothetical protein |
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| Protein accession | NP_791578 |
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| Protein GI | 28868959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0222325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATC CGGAAATCAT TCATCACGGT GCTGTCGACA CGGTGACGGG TTCGTGCCAT
CAACTGCGTA TGGATGCGTC GAGCAGCCTG CTGATCGACT GCGGCTCAGT GCAGGAGCGC
GGCGCGTCAG GCGAGGTCTC GCCGTTCGGG TTTGACCCCG AGGCCATCAG AGCGCTTCTG
ATCACTCATG TGCACAACGA CCATGTCGGG CGTATTCCCG AGTTACTGGC GTCAGGCTAT
GAAGGGCCGA TACTGTGCAG CGAGCCGAGC GCTCATCTGC TGCCACTGGT GATGGAAGAC
AGCCTGAAGA TCCAGTTTGC ACATGATCCC GAGCAGGCCG AGCGCCACCT TGCGCTGATC
AACAAACGGA TCATCGCGCT GCCATTCGAT AACTGGTTCA GTCTGGTCGA CCGCGAGTCG
CTGCACTGCA GGGTTCGCCT GCAACGCGCG GGGCATATTC TGGGTTCGGC TTATATAGAA
TGCGATCTGC ACTACCCACT GGAAGGGTGT TCGATGCGTG TGGTTTTTTC CGGTGATCTT
GGCGCGAGCC ACACACCGTT TCTGCCTGCG CCAAAGCCAC CCGAGCACGC CGACATACTG
GTGCTGGAAA GTACCTACGG TGATCGTCTT CATGAAGATC GCAGCATTCG TCAGCAGGAA
CTCGAGCGCA TCATAGACCG GGCGCTGGAA GACAACGGCA CGGTGCTGAT TCCGGCGTTC
AGCATCGGTC GCACTCAGGA GCTGCTCTAC GAACTGGAGG ACATCCTGCG GCGCAAGATG
CCATCCGGTG ATGCTGCCCA CAGCAGTGCG CGCCTGAATG AGGATGACGT GCCGCCTGCG
GACTGGTCGC GGCTGCCGAT CATCCTCGAC TCGCCGCTGG CAAGTCGCTT CACCCGGGCC
TACCAGTCAT TTGAAGACTA CTGGGACGAA GGTGCCCGCC TGAGGCTGGA CGCCGGACGC
AAGCCGCTCG GCTTTGACCA GCTCATTACC ATCAACACCC ACGAAGAGCA CCTGCGCACA
GTCAACTATC TGGCCAGCAC TGCGCGGCCG GCCATTGTCA TCGCCGGTAA CGGCATGTGT
GCCGGCGGCA GGATCGTCAA TTACCTGAAA GCCATGCTGG GCGATCCTCG GCATAACGTG
GTGTTTGTCG GCTATCAAGG GAAAGGAACG CCTGGGGCTG CCATTCAGGC GCATGGCCCG
TCGGGCGGAT ACGTCGAGCT GGATCGCGAG CGTTTCGATA TTCGCGCTGC AATTCACACC
GCCAAAGGCT ATTCGGCCCA CGCTGATCAG GCCGAACTTG TCGAATTCGT CACGGGTATG
AATAAGTGGC CGGCGCAGAT TCGCCTTGTG CACGGCGAAA CAACGGCTAA AAAGGCGCTG
AGAAACATTC TGGAGCGTAA ATACACGCTT GAAAAAATTC AGGCCGAGTT GATCGTTCCC
TGA
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| Protein sequence | MSYPEIIHHG AVDTVTGSCH QLRMDASSSL LIDCGSVQER GASGEVSPFG FDPEAIRALL
ITHVHNDHVG RIPELLASGY EGPILCSEPS AHLLPLVMED SLKIQFAHDP EQAERHLALI
NKRIIALPFD NWFSLVDRES LHCRVRLQRA GHILGSAYIE CDLHYPLEGC SMRVVFSGDL
GASHTPFLPA PKPPEHADIL VLESTYGDRL HEDRSIRQQE LERIIDRALE DNGTVLIPAF
SIGRTQELLY ELEDILRRKM PSGDAAHSSA RLNEDDVPPA DWSRLPIILD SPLASRFTRA
YQSFEDYWDE GARLRLDAGR KPLGFDQLIT INTHEEHLRT VNYLASTARP AIVIAGNGMC
AGGRIVNYLK AMLGDPRHNV VFVGYQGKGT PGAAIQAHGP SGGYVELDRE RFDIRAAIHT
AKGYSAHADQ AELVEFVTGM NKWPAQIRLV HGETTAKKAL RNILERKYTL EKIQAELIVP
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