| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1741 |
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| Symbol | gph-2 |
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| ID | 1183378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1909195 |
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| End bp | 1909866 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393113 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | NP_791566 |
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| Protein GI | 28868947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGA GAGCGGTTTT ATTCGACATG GATGGCACTT TGCTCGACAC CGCGCCGGAC
TTCATCGCCA TTGCTCAGGC AATGCTGGCT GACCGCAGCC TGCCTGCCGT CGCCGACAAA
CTGATCCGCG ACGAGATTTC CGGTGGCGCC AGGGCGATGG TCTCCGCGAC CTTTGGCCTG
TCGCCGGAAG CGCCGCAATT CGAGGCCCTG CGCCTGGAGT TTCTGGAGCG CTATCAACGT
GACTGCGCTG CGCACAGCAA GCTGTTCGAC GGCATGGGCG AGTTGCTGGC CGACATTGAA
AAGGCCGGAT TGATCTGGGG CGTGGTGACC AACAAACCGG TACGCTTCGC CCAGCCGATC
ATGGAGCAAC TCGGCCTGGC CGAACGTTCT GCCGTGCTGA TCTGCCCGGA CCACGTTACG
CACAGCAAGC CGCACCCCGA GCCGATGATT CTGGCCTGCA AGATGCTCGA CCTGGACCCG
GCCAGCGTTC TGTTTGTGGG TGATGACCTG CGTGACATTG AGTCCGGACG GGATGCAGGC
ACTAAAACCG CCGCCGTGCG CTACGGCTAC ATCCACCCCG ACGACAACCC GGACCACTGG
GGTGCAGACG TGGTAGTCGA TCACCCGCTC GAGCTGCGCA AGGTGCTGGA TAACGCACTG
TGCAGTTGCT GA
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| Protein sequence | MRLRAVLFDM DGTLLDTAPD FIAIAQAMLA DRSLPAVADK LIRDEISGGA RAMVSATFGL
SPEAPQFEAL RLEFLERYQR DCAAHSKLFD GMGELLADIE KAGLIWGVVT NKPVRFAQPI
MEQLGLAERS AVLICPDHVT HSKPHPEPMI LACKMLDLDP ASVLFVGDDL RDIESGRDAG
TKTAAVRYGY IHPDDNPDHW GADVVVDHPL ELRKVLDNAL CSC
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