| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1737 |
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| Symbol | |
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| ID | 1183374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1903951 |
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| End bp | 1906407 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393109 |
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| Product | sensory box/GGDEF domain/EAL domain protein |
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| Protein accession | NP_791562 |
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| Protein GI | 28868943 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC CATGGACCTT CTCCAAGCCC CGTCTGCTGG GCATCGTGTG GCCTTTTATT
GCCGTCGCAC TGTTTCAGGC GTTGTTGGGG TGCGTCAGCC TCTACACCAT GTCTGCGGTG
CGCAGCTACG TGGCGGGTGA GAGTCTCTGG TCCAAGGGTC AGAAAGACGC TATCCACTAT
CTGAGCCTGT ACGCCAATAC CCACGATGAA CGTGACTACC TCAAGTACCA GAACGCCTTC
GCTGTGCCAC AGGGTGGCCA GGCCCTGCGC AAGGCGCTTG ACCAACCTAT TCCATCGCTG
TCAGACGCCC GTGCCGGGAT CATTCAGGGC GGCAATCACC CGGATGATGT GAATGGCATC
ATCTGGATGT ACCTGAACTT CCACAACTTC AGCTTCATGA AACAAGCCAT TCATTATTGG
GCAGTGGGCG ACAGCTACCT CACGCAGCTC AACGAGCTTG CACTGCATAT TCACGAGCGG
GTCAGCCGCG GCGATGTGGG CTCCGCGCAA GTCGATCAGT GGCGCGTGCA GATCAACGTC
ATCAACGAAG GTGTAACGCC CGCGGCCAAG GCATTCAGCG ATGCGCTGGG CGAAGGTTCG
AGGTTTATCC TCAATCTGCT GATGGCGGTC AATCTGTTCA CCGCTGTCGT GCTGATTCTT
CTCGCGCTGT TGCGCGTGCG CCGCCTGATC GTCCAGCGGC GCTTGTTTGC CGACGCCTTG
CAACTGGAGA AAGAGCGCGC CCAGATTACC CTTGAGTCTA TCGGCGACGG GGTGATCACC
ATCGATGTGG CGGGCGCTAT CGTGTACATG AACCCCGCTG CCGAAGGCCT CACGCACTGG
AAAAGCACTC AGGCCAGCGG CCTGCCTCTG GCGGCATTGT TCAACCTGCT GGATGAAAAC
GATCAGAAAG ACAGTTCGAC GCTCATTGAT CAGATTGTCA CCGGCAAGCT CAAAGGCGGC
AGCGCCGACA GCAAGCTGAT CCAGCGGCTG GATGGCAGCA CGGTCTCGGT GGCGCTGGTC
GGTACGCCTA TCTACACCGA AGGGGTGGTC AGCGGCGCGG TGCTGGTGCT GCATGACATG
ACTCAGGAGC GGCAGTACAT CGCTGATCTG TCATGGCAGG CCGCTCATGA TCCATTGACC
GGGCTGGTCA ATCGCAGTGA GTTCGAGCGA CGCTTGCAAC AGGTGCTCGA TGACAGCAGT
ACCGGCAGTC ACTGCCTGAT GTTTCTCGAC CTCGACCAGT TCAAGCTGGT CAATGACACC
GGTGGCCATG CCGCAGGTGA CGAGCTGTTG CGCCAGCTCT GTCAGGCCTT GCCGCAGGGC
TTGCGCGACA GTGATACGCT GGCCCGGCTG GGCGGTGACG AGTTTGGCGT GTTGCTGGTC
GACTGCACCA CCAGCACCGC GCACGACATT GCCGAGGCGT TGCGCGAGAT TGTCCAGGGC
CTGCATTTCA TGTGGAAAGG CCGGCCATTC ATGACCACTG TCAGCATTGG TCTGGTGCAC
CTTGGCGACA CGCCCGCCAC GCTGGAAGGG TCGCTGTCTG CTGCCGACAT GGCCTGCTAC
ATGGCCAAGG AGAAGGGCCG CAACCGGGTT CAGGTCTACA GCGTCGACGA TCTGACCCTG
TCGATGCGTT TCGGCGAGAT GGCCTGGATA CAGCGCTTGC ACATGGCAAT GGATGAAAAT
CGTTTCTGCC TTTATGCGCA GGAAATCGCT TCGATCAAGG ATCAGGGCAA CGAGGTTCGC
CACATTGAAA TCCTCCTGCG CCTGCGTGAC GAGTCCGGGC GCATGGTTGT TCCGGACAAC
TTCATTCCGG CCGCCGAGCG CTATGGGCTG ATGACCACGC TGGACCGTTG GGTGGTGCAG
AATGTCTTCA AAGTCATCGC TCAATGCCAG AGCGATGACC GGCATCAGGT GCCGCAAGCG
CTATGTGCTA TAAATTTGTC CGGTTCAAGT ATTGGAGATG ACACTTTTCT CGAATACCTG
AAACAGCAGT TCAAGACCTT TGCCGTGGCG CCCGAAATGA TCTGCTTCGA GATCACTGAA
ACCAGCGCCA TTGCAGACCT GGACAGCGCC ATCCGTTTCA TCAATGAATT GAAGGCGCTG
GGCTGTCAGT TTTCCCTGGA TGACTTCTGT TCAGGCATGT CCTCGTTTGC CTACCTCAAG
CATCTGCCCG TGGACTTTTT GAAAATTGAT GGCAGTTTTG TAAAGGACAT GCTCGACAAC
CCGATCAACA AGGCCATGGT CGAAGTCATC AACAATATCG GTCATGTGAT GGGCAAGCGC
ACCATCGCAG AGTACGTGGA AACGCCGCAG GTAGAGTCTG CATTGCAGGA GATGGGCGTG
GATTTTGCAC AGGGCTATCT GATTGCGCGC CCTGAATTGT TCACGTGTGA GAGCCTGTAC
ATTCAACCCG TACGGCCTGA CCCCTTGATG TTCGGCGCGC CAGGAACGCT ACGTTAA
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| Protein sequence | MKQPWTFSKP RLLGIVWPFI AVALFQALLG CVSLYTMSAV RSYVAGESLW SKGQKDAIHY
LSLYANTHDE RDYLKYQNAF AVPQGGQALR KALDQPIPSL SDARAGIIQG GNHPDDVNGI
IWMYLNFHNF SFMKQAIHYW AVGDSYLTQL NELALHIHER VSRGDVGSAQ VDQWRVQINV
INEGVTPAAK AFSDALGEGS RFILNLLMAV NLFTAVVLIL LALLRVRRLI VQRRLFADAL
QLEKERAQIT LESIGDGVIT IDVAGAIVYM NPAAEGLTHW KSTQASGLPL AALFNLLDEN
DQKDSSTLID QIVTGKLKGG SADSKLIQRL DGSTVSVALV GTPIYTEGVV SGAVLVLHDM
TQERQYIADL SWQAAHDPLT GLVNRSEFER RLQQVLDDSS TGSHCLMFLD LDQFKLVNDT
GGHAAGDELL RQLCQALPQG LRDSDTLARL GGDEFGVLLV DCTTSTAHDI AEALREIVQG
LHFMWKGRPF MTTVSIGLVH LGDTPATLEG SLSAADMACY MAKEKGRNRV QVYSVDDLTL
SMRFGEMAWI QRLHMAMDEN RFCLYAQEIA SIKDQGNEVR HIEILLRLRD ESGRMVVPDN
FIPAAERYGL MTTLDRWVVQ NVFKVIAQCQ SDDRHQVPQA LCAINLSGSS IGDDTFLEYL
KQQFKTFAVA PEMICFEITE TSAIADLDSA IRFINELKAL GCQFSLDDFC SGMSSFAYLK
HLPVDFLKID GSFVKDMLDN PINKAMVEVI NNIGHVMGKR TIAEYVETPQ VESALQEMGV
DFAQGYLIAR PELFTCESLY IQPVRPDPLM FGAPGTLR
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