| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1736 |
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| Symbol | |
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| ID | 1183373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1902001 |
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| End bp | 1903827 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393108 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_791561 |
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| Protein GI | 28868942 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.609322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGATG ATTTGCCCGA AGGTGCTCAC CCATCGTCAG TCGGCCATCG CGATACGCTG
AGCTGGGCCG AGATCCGTCG TCTTGCGCTG CGCCATAAAA AAGCCCTGTG GCTGGCCAAT
GGCGTCGCAG TTCTGGCGAC CCTGTGCAGC GTGCCGATCC CGTTGCTGTT GCCGTTGCTG
GTCGACGAAG TATTGCTGGG GCGCGGCGAC GCTGCCCTCA ACGTCATGAA CCACCTGCTG
CCTGACAGCT TGCAAAAAGC TGTGGGTTAC ATCGGCCTGA TGCTCTTGCT GACGCTGGTG
CTGCGGGTCG GGGCGCTGGT GTTCAATGTG TTGCAGGCGC GGCTGTTTGC CGGGCTGGCC
AAGGATATTG TCTATCGCAT CCGGCTGCGT CTGATCGAGC GCCTCAAGCG GATTTCCCTG
CGCGAATACG AAAGCCTGGG CAGCGGCACA GTCACCACGC ATCTGGTGAC CGACCTGGAC
ACGCTGGACA AGTTCGTCGG CGAGACCCTC AGTCGCCTGC TGGTGTCTAC GCTGACCCTG
GCCGGCACGG CGGGCATCCT GATGTGGATG CACTGGAAGC TGGCCCTGCT GATCATGCTC
TTCAACCCGT TGGTGATTCT GCTCACGGTG AAGCTGGGCA AGCGGGTCAA ACACCTCAAG
AAACTGGAAA ACGACAGTAC CTCGCGGTTC ACTCAGGCGC TGAGCGAAAC CCTGGATGCG
ATTCAGGAGG TCAGGGCAGG CAACCGGCAG GGCTTTTTCC TCGGGCGTCT GGGCGCAAAA
GCGCAGGAAG TTCGCGATTA CGCGATCAAT TCACAGTGGA AAAGCGACGC TTCCGGGCGG
GCCAGCGGGC TGCTGTTCCA GTTCGGCATC GACATCTTTC GCGCGGCGGC AATGCTCACC
GTGCTGTTCT CGGACCTGTC CATCGGGCAG ATGCTCGCGG TCTTCAGTTA CCTGTGGTTC
ATGATGACGC CGGTTGAGCA ACTGCTGAAC CTGCAATACG CCTATTACGC GGCGGGCGGG
GCTCTGACGC GCATCAACGA ACTGCTCGCG CGTGCCGACG AGCCGCACTA CGCGGGCGGC
GCGGACCCTT TCAAGGGGCG CGAAACGGTC AGTGTCGAGG TGCGCGGTCT GAGTTTCGGC
TATGGCGAGG ATCTGGTGCT GGACCAACTG AACCTGAGCA TTGCACCGGG CGAGAAGGTC
GCCATTGTCG GTGCCAGTGG TGGCGGCAAG AGCACCCTGG TGCAGTTGCT GCTGGGCCTG
TACACGGCCC GTACCGGAGT CATCCGCTTT GGTGGCGTCA GTCAGCAGGA TATCGGTCTG
GACACAGTGC GTGAGAACGT CGCCGTGGTC CTGCAGCACC CGGCACTGTT CAACGACACT
GTGCGCGCCA ACCTGACCAT GGGCCGTGAC TGCAGCGACG AAGCCTGCTG GAGGGCGCTG
GAGGTTGCGC AACTGGAATC GGCCATTCGC GACCTGCCGC AAGGCCTGGG CAGCGTGCTG
GGGCGTTCCG GTGTGCGCCT GTCTGGCGGG CAGCGCCAGC GCCTGGCCAT CGCGCGCATG
GTGTTGTCCG ATCCGAAAGT GGTCATCCTC GACGAAGCGA CCTCGGCGCT GGACGCCGCC
ACCGAGTTCA ACCTGCACCA GGCCCTGGCG CGGTTTCTGC GCAGCCGCAC AACGCTGATC
ATCGCCCATC GTCTGTCAGC CGTTAAGCAG GCGGACCGGG TGCTGGTGTT CGACGGCGGG
CGAATCGTCG AAGACGGCGA CCATCAGCAA CTGATTGCCG ATGGAGGTCT TTACGCCAAG
CTGTACGGAC ATCTGCAACA AATCTGA
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| Protein sequence | MRDDLPEGAH PSSVGHRDTL SWAEIRRLAL RHKKALWLAN GVAVLATLCS VPIPLLLPLL
VDEVLLGRGD AALNVMNHLL PDSLQKAVGY IGLMLLLTLV LRVGALVFNV LQARLFAGLA
KDIVYRIRLR LIERLKRISL REYESLGSGT VTTHLVTDLD TLDKFVGETL SRLLVSTLTL
AGTAGILMWM HWKLALLIML FNPLVILLTV KLGKRVKHLK KLENDSTSRF TQALSETLDA
IQEVRAGNRQ GFFLGRLGAK AQEVRDYAIN SQWKSDASGR ASGLLFQFGI DIFRAAAMLT
VLFSDLSIGQ MLAVFSYLWF MMTPVEQLLN LQYAYYAAGG ALTRINELLA RADEPHYAGG
ADPFKGRETV SVEVRGLSFG YGEDLVLDQL NLSIAPGEKV AIVGASGGGK STLVQLLLGL
YTARTGVIRF GGVSQQDIGL DTVRENVAVV LQHPALFNDT VRANLTMGRD CSDEACWRAL
EVAQLESAIR DLPQGLGSVL GRSGVRLSGG QRQRLAIARM VLSDPKVVIL DEATSALDAA
TEFNLHQALA RFLRSRTTLI IAHRLSAVKQ ADRVLVFDGG RIVEDGDHQQ LIADGGLYAK
LYGHLQQI
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