Gene PSPTO_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1732 
Symbol 
ID1183369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1899411 
End bp1899938 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content59% 
IMG OID637393104 
Producthypothetical protein 
Protein accessionNP_791557 
Protein GI28868938 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.568554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTC TTCGTGCCAT TTGTACCGCG GTAGCCCTGG TCTGTGCCAG CGGCCAGGTC 
TTCGCCGACA CCGCCAGTCA CAACGCGAGC GCCGAAACAT TCCTGAAGCT TGCCAACGCC
GACCGCCTGG GCGCTCCGGT CTACGCACAG GTTCAACAGA TGTTCGCCCA GCGTTTTGCT
GAAACCAAGG CACCTGCATC GAAAAAAGCG CTGCTCGAAA CCTATCAGGC CAAAGCCAAC
ACTGCGCTGG ACCAGGCAAT TGGCTGGAAC AAGCTCAAGC CTGAAATGGT CAAGCTGTAC
ACCGCCAACT TCACCGAAAG CGAGCTGAAG GATCTGGTTG CGTTCTACCA GTCCCCGCTG
GGCAAGAAAG TGATGACCAA AATGCCTGAG CTGGCTCAGC AATCGGCGCA ACTGACCCAG
AGCAAGCTGG AAAGCGCAGT GCCGGTCGTC AACAAGCTGC TGGCTGACAT GACCGCCGAA
CTGGAACCTG CCAAGGCAGC GGCTCCCGCT CCGGCCAAGA AGCCCTGA
 
Protein sequence
MTRLRAICTA VALVCASGQV FADTASHNAS AETFLKLANA DRLGAPVYAQ VQQMFAQRFA 
ETKAPASKKA LLETYQAKAN TALDQAIGWN KLKPEMVKLY TANFTESELK DLVAFYQSPL
GKKVMTKMPE LAQQSAQLTQ SKLESAVPVV NKLLADMTAE LEPAKAAAPA PAKKP