| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1731 |
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| Symbol | fumC-1 |
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| ID | 1183368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1897847 |
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| End bp | 1899241 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393103 |
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| Product | fumarate hydratase, class II |
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| Protein accession | NP_791556 |
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| Protein GI | 28868937 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.31099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCGCA CCGAAACCGA CAGCATCGGC CCGATCGAAG TCCCTGAAGA TGCCTATTGG
GGCGCGCAGA CCCAACGCTC ACTGATCAAC TTTGCGATTG GCGACCAGCG TATGCCGTTG
GCCGTTCTGC ATGCGTTGAC CTTGATCAAG AAAGCCGCCG CACGCGTCAA CGACCGCAAC
GGCGACCTGC CGGCCGATAT CGCCCGGCTG ATCGAACAGG CTGCCGACGA GGTGCTCGAC
GGTCAGCACG ACGCGCAGTT TCCGCTGGTG GTCTGGCAGA CCGGCAGTGG CACGCAGAGC
AACATGAACG TCAACGAAGT GATCGCCGGC CGCGCCAACG AACTGGCCGG CCAGGGCCGT
GGCGGCAAAT CGCCGGTCCA CCCCAACGAT CACGTCAATC GCTCGCAAAG CTCCAACGAC
TGCTTTCCGA CAGCCATGCA CATTGCCACT GCGCAAGCGG TCAAGGAACA GCTGCTGCCG
GCGATTGCCG AGCTGTCCAG CGGGCTGGCC GAACAGGCCG CGCGTCACAT GAAGCTGGTC
AAGACCGGGC GCACGCACAT GATGGACGCC ACGCCGATCA CCTTTGGCCA GGAGCTTTCG
GGGTTCGTCG CGCAACTGGA TTACGCAGAA AAAGCCATTC GCGCCGCCCT GCCCGCCGTC
TATGAACTGG CGCAAGGTGG CACCGCAGTC GGCACCGGGC TCAACGCGCC GAAAGGCTTC
GCTGAAGCCA TCGCGGCAGA ACTGGCTGCA CTGTCGGGCT TGCCGTTCGT CACCGCGCCG
AACAAATTCG CCGCACTGGC GGGCCACGAG CCGCTGGCTG CGCTTTCCGG CGCATTGAAA
ACGCTGGCCG GCACCCTGAT GAAGATCGCC AACGACCTGC GCTTGCTGGG TTCCGGCCCG
CGTGCCGGGT TGGCGGAAGT CAGGTTGCCA GCCAACGAGC CCGGCAGCTC GATCATGCCC
GGCAAGGTTA ACCCGACTCA GTGCGAGGCC CTGTCGATGC TGGCCTGCCA GGTTATGGGC
AACGATGTGA CCATCGGTTT TGCCGCCAGC CAGGGCCATT TGCAACTGAA CGTCTATAAG
CCGGTGATCA TTCACAACGT ATTGCAGTCG ATCCGACTGC TGGCCGACGG TTGCAGCAAT
TTCAATGAAC ACTGCGTCGC CGGCATGGAG CCAGACGCCG AAAAAATGGC TGAGCACCTT
GAACGCGGCC TGATGCTGGT CACCGCGCTC AACCCGCACA TCGGCTATGA CAAGTCGGCG
CACATTGCCA AAAAAGCCTA CACCGAAGGC CTGACCCTGC GTGAAGCAGC GCTGGCGCTG
GGTTACCTGA CCGACGAGGA GTTCGACGCC TGGGTGCGCC CGGACAAGAT GCTGGAGGCG
GGCAGCAATG GTTGA
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| Protein sequence | MSRTETDSIG PIEVPEDAYW GAQTQRSLIN FAIGDQRMPL AVLHALTLIK KAAARVNDRN
GDLPADIARL IEQAADEVLD GQHDAQFPLV VWQTGSGTQS NMNVNEVIAG RANELAGQGR
GGKSPVHPND HVNRSQSSND CFPTAMHIAT AQAVKEQLLP AIAELSSGLA EQAARHMKLV
KTGRTHMMDA TPITFGQELS GFVAQLDYAE KAIRAALPAV YELAQGGTAV GTGLNAPKGF
AEAIAAELAA LSGLPFVTAP NKFAALAGHE PLAALSGALK TLAGTLMKIA NDLRLLGSGP
RAGLAEVRLP ANEPGSSIMP GKVNPTQCEA LSMLACQVMG NDVTIGFAAS QGHLQLNVYK
PVIIHNVLQS IRLLADGCSN FNEHCVAGME PDAEKMAEHL ERGLMLVTAL NPHIGYDKSA
HIAKKAYTEG LTLREAALAL GYLTDEEFDA WVRPDKMLEA GSNG
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