Gene PSPTO_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1730 
Symbol 
ID1183367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1897240 
End bp1897854 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID637393102 
ProductNAD(P)H dehydrogenase, quinone family 
Protein accessionNP_791555 
Protein GI28868936 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGACG CCAAAAGCGG CGCGACACCC CTGGAAGGCA ACGGCAAACG CATCCTGATG 
GTTTACGGTA CGCCGAAAGC CATCAGTTTT TGCCACGCAC TGGGCGACGC CTACGCGCAG 
ACTGCACGGG GCGAGGGGCA CGTGGTGCGG ATCATCAGGC TGGGCGAGCT GGACTTCGAC 
CCCATTCTGC ACAACGGCTA CGATCAGACC CAGACCCTGG AGCCTGACCT GCTCGAGGCG 
CAGCGCCAGA TTCACTGGGC CGAGCATCTC GTGTTCGTCT ATCCGGTCTG GTGGGGCGGC 
TTGCCGGCCC TGCTGACGGG TTTCTTCGAC CGGGTGTTGA CGCCCGGCTT TGCCTCCAAG 
GCCCACGGCC GCAAGCAGCA CGCCAACGAA TTGCTCAGGG GTCGGACGGC AGAACTGCTG 
GTGGCAATGG ACACTCCGCC GCGCTACTTT CGCTGGATCT ACGGCGCACC GGCTCACCGA 
CAGATGGTGC GCACTATCTT GAGCTTTTGC GGCATCAAGA CCACGCGCCT GACCGAGTTT 
GCCCCGATAC ACAGCGCCAC CGAGCAACAG CGTCAGGAGT GGATTGTGCA AGCGCAGGCC 
TTGGGCAAGC GCTGA
 
Protein sequence
MVDAKSGATP LEGNGKRILM VYGTPKAISF CHALGDAYAQ TARGEGHVVR IIRLGELDFD 
PILHNGYDQT QTLEPDLLEA QRQIHWAEHL VFVYPVWWGG LPALLTGFFD RVLTPGFASK 
AHGRKQHANE LLRGRTAELL VAMDTPPRYF RWIYGAPAHR QMVRTILSFC GIKTTRLTEF 
APIHSATEQQ RQEWIVQAQA LGKR