Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1721 |
Symbol | |
ID | 1183358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1891475 |
End bp | 1891954 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637393093 |
Product | hypothetical protein |
Protein accession | NP_791546 |
Protein GI | 28868927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000178667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTGCT TCAACCAGCC TGCAATTGAT CAGGATCTTC ACCCGGAGCG TAGAACCTTT GCTCCTGTTG TGTTGCCTGC CCTCCTAAGT ACCTACCGGT CAGCCAGAGC GCCATACTAT AAAGCGCGCT TCAACTGCCT GTCTTGTTCC AGTCAGGTTC TCCGCCCAGC CAGGCTTTTG TATCAAATGT CGGCCCGCGT TTACTGGAAT CTTTATTTAT GCACGGTATT GTTCCGTGTT GTTTCAGGAA ACACCTTGAA TATGAATACT CAAACTCAAC ATGCAATTCA CACGCTTACC CATGCTTTTG CCCCGATGAA CTGCCTGATC ATGGCCGCTC GCAAAGGCTG CTTCAGCTTC ACCATCGTCA ACGAACATGG CATCGCTCGT CACAGCGAAC GCCTGTACCC CGATCAGTAC GCCAGCGCAG AACCGCTGCA GGCTGTGATC GAGCGTACCC GTCAGGCCCT CATTGCCTGA
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Protein sequence | MVCFNQPAID QDLHPERRTF APVVLPALLS TYRSARAPYY KARFNCLSCS SQVLRPARLL YQMSARVYWN LYLCTVLFRV VSGNTLNMNT QTQHAIHTLT HAFAPMNCLI MAARKGCFSF TIVNEHGIAR HSERLYPDQY ASAEPLQAVI ERTRQALIA
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