Gene PSPTO_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1721 
Symbol 
ID1183358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1891475 
End bp1891954 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content53% 
IMG OID637393093 
Producthypothetical protein 
Protein accessionNP_791546 
Protein GI28868927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000178667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTGCT TCAACCAGCC TGCAATTGAT CAGGATCTTC ACCCGGAGCG TAGAACCTTT 
GCTCCTGTTG TGTTGCCTGC CCTCCTAAGT ACCTACCGGT CAGCCAGAGC GCCATACTAT
AAAGCGCGCT TCAACTGCCT GTCTTGTTCC AGTCAGGTTC TCCGCCCAGC CAGGCTTTTG
TATCAAATGT CGGCCCGCGT TTACTGGAAT CTTTATTTAT GCACGGTATT GTTCCGTGTT
GTTTCAGGAA ACACCTTGAA TATGAATACT CAAACTCAAC ATGCAATTCA CACGCTTACC
CATGCTTTTG CCCCGATGAA CTGCCTGATC ATGGCCGCTC GCAAAGGCTG CTTCAGCTTC
ACCATCGTCA ACGAACATGG CATCGCTCGT CACAGCGAAC GCCTGTACCC CGATCAGTAC
GCCAGCGCAG AACCGCTGCA GGCTGTGATC GAGCGTACCC GTCAGGCCCT CATTGCCTGA
 
Protein sequence
MVCFNQPAID QDLHPERRTF APVVLPALLS TYRSARAPYY KARFNCLSCS SQVLRPARLL 
YQMSARVYWN LYLCTVLFRV VSGNTLNMNT QTQHAIHTLT HAFAPMNCLI MAARKGCFSF
TIVNEHGIAR HSERLYPDQY ASAEPLQAVI ERTRQALIA