| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1720 |
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| Symbol | |
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| ID | 1183357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1889959 |
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| End bp | 1891233 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637393092 |
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| Product | outer membrane protein |
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| Protein accession | NP_791545 |
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| Protein GI | 28868926 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0182152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TGACAAAAGC ACTTAACCGG ACAACTCTTG GACTCGCCCT GGGTCTGGCT
TCTTCTCAAC TGCTCGCTGC CGGCTTCGCC CTCAACGAAC AAAGCATCAG CGGCATGGGC
ACCGGCTTTG CAGGTCGCTC CTCCTCCGCC GACGATGCCA GCACCGTGTT CGGCAACCCT
GCCGGCATGT CGCGTATCAA ACGCGAACAA ATCAGCGTAG GCGCCGCAGC CGTGATCGCC
AAGACCGACA TCGACAATGG TCGTGGCACG TTCGGCGGCA GCAACGACGG TGACATGGTT
CCCGTGGTTG GTGTGCCAAT GGGCTACTAC GTCAAACCTA TCGATGATCA CTGGGCATTT
GGTCTGGGCG TGTACGTTCC GTTCGGCCTG GTCACTGATT ACGAGAAAGG CTTTGCCGGC
CGTTACTGGG GTGACAAGAG CCACGTACAG ATCGTGACCT TTCAGCCGAC CGTCAGCTAC
GCATTCAATG ACAAGGTTTC TATCGGTTTT GGCCCGACCA TCAACCGTAT CGACGGTGAA
TTGACATCGG CTGTCCCTAA CCGAGCGTCC CTCGGCACCA ACGATGGCAA GGTGAAGATC
AAGGGCGATG ACACTGCAAT CGGCTTCAAT GCCGGTATTC TGGTGCAGGC TACTGACACC
ACGCGCCTGG GTCTGACTTA CCATTCCAAA GTCGATTACA AGCTCGAAGG CAAGACCAAG
GTAGAAGGCT CTGGTTTTGG TCCTTTCGGC GGTCAGAAGT ATGACGCCTC GCTGGATATC
TCCACGCCTG AGTCGGTGGA CTTCTCCATC ACTCAGCAGC TTGATGAAAA CTGGACCGTT
TATGCAGGCA GCACCTGGAC TCGCTGGAGC CGCCTGAAAG ACATCACGGT CGAAAACAGC
GGCGTGCCCA CAGCATTGGC CTCAAGCATT GGCACCATTA CGGAAGAACA GGACTGGCAC
GACACTTGGG CACACGCCAT CGGTGCTTCG TACAAGGTCA ATAAGGAGTG GACGCTGCGC
ACTGGTTTCT CTGTTGATCA GTCGCCGACC AACAACGTTA ATCGATCCCC TCGCATCCCG
ACTGGCGATC GCAAGATCAT CAGCTTCGGT GCTGGCTGGA GCCCGACCGA CGACCTGACC
ATTGACGTGG CGTACTCGTA CCTGCGTGAA GATGAAACCA AGATCCGCGA CAGCAGCGCG
ACCAAAGGCT CGTACAGCGC CGATTACCGC AATACGGCGC ATGGCCTTGG CACTTCAGTT
ACCTATCGTT TCTGA
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| Protein sequence | MKIMTKALNR TTLGLALGLA SSQLLAAGFA LNEQSISGMG TGFAGRSSSA DDASTVFGNP
AGMSRIKREQ ISVGAAAVIA KTDIDNGRGT FGGSNDGDMV PVVGVPMGYY VKPIDDHWAF
GLGVYVPFGL VTDYEKGFAG RYWGDKSHVQ IVTFQPTVSY AFNDKVSIGF GPTINRIDGE
LTSAVPNRAS LGTNDGKVKI KGDDTAIGFN AGILVQATDT TRLGLTYHSK VDYKLEGKTK
VEGSGFGPFG GQKYDASLDI STPESVDFSI TQQLDENWTV YAGSTWTRWS RLKDITVENS
GVPTALASSI GTITEEQDWH DTWAHAIGAS YKVNKEWTLR TGFSVDQSPT NNVNRSPRIP
TGDRKIISFG AGWSPTDDLT IDVAYSYLRE DETKIRDSSA TKGSYSADYR NTAHGLGTSV
TYRF
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